Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol BC3
Gene Symbol Synonym bc3, bc-3, OsDRP2B, DRP2B
CGSNL Gene Name BRITTLE CULM 3
Gene Name Synonym brittle culm3, brittle culm 3, brittle culm-3, dynamin-related protein 2B
Protein Name DYNAMIN-RELATED PROTEIN 2B
Allele
Chromosome No. 2
Explanation A brittle or soft culm. Rather short height and imperfect emergence of panicles. The brittleness of culm and panicle axis of this mutant is not so distinct as that of bc1 and bc2. [132] PO:0009047; stem ; PO:0009049; inflorescence. GRO:0007048; 04-stem elongation stage ; GRO:0007148; 05-booting stage ; GRO:0007044; 06-heading stage. GO:0072583: clathrin-dependent endocytosis.
Trait Class Vegetative organ - Culm
Vegetative organ - Root
Expression
Sequence/Locus
cDNA Accession No. AK099699
MSU ID LOC_Os02g50550.1
RAP ID Os02g0738900
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM) 172.0
Link map Classical linkage map
References
Kawai T., Akahoshi R., Shelley I.J., Kojima T., Sato M., Tsuji H., Inukai Y.
Front Plant Sci 2022  13  834378
Auxin Distribution in Lateral Root Primordium Development Affects the Size and Lateral Root Diameter of Rice.
Wu B., Zhang B., Dai Y., Zhang L., Shang-Guan K., Peng Y., Zhou Y., Zhu Z.
Plant Physiol. 2012  159(4)  1440-52
Brittle culm15 encodes a membrane-associated chitinase-like protein required for cellulose biosynthesis in rice.
Hirano K., Kotake T., Kamihara K., Tsuna K., Aohara T., Kaneko Y., Takatsuji H., Tsumuraya Y., Kawasaki S.
Planta. 2010  232  95-108
Rice BRITTLE CULM 3 (BC3) encodes a classical dynamin OsDRP2B essential for proper secondary cell wall synthesis
Xiong G,Li R,Qian Q,Song X,Liu X,Yu Y,Zeng D,Wan J,Li J,Zhou Y
Plant J. 2010  64(1)  56-70
The rice dynamin-related protein DRP2B mediates membrane trafficking and thereby plays a critical role in secondary cell wall cellulose biosynthesis.
Iwata, N., H. Satoh and A. Yoshimura
RGN 1989  6  106-108.
Linkage map for Nishimura's chromosome 8.
Iwata, N. and T. Omura
Jpn. J. Genet. 1984  59(3)  199-204.
Studies on the trisomics in rice plants (Oryza sativa L.). VI. An accomplishment of a trisomic series in japonica rice plants.
Iwata, N. and T. Omura
J. Fac. Agr. Kyushu Univ. 1977  21  117-127.
Linkage studies in rice (Oryza sativa L.). On some mutants derived from chronic gamma irradiation.
TextPresso Search Search textpresso for BC3 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0060070
Ontologies
Gene Ontology lateral root formation( GO:0010311 )
lateral root development( GO:0048527 )
auxin mediated signaling pathway( GO:0009734 )
response to auxin stimulus( GO:0009733 )
GTP binding( GO:0005525 )
secondary cell wall biogenesis( GO:0009834 )
lignin metabolic process( GO:0009808 )
plasma membrane( GO:0005886 )
GTPase activity( GO:0003924 )
endocytosis( GO:0006897 )
trans-Golgi network( GO:0005802 )
clathrin-coated endocytic vesicle( GO:0045334 )
secondary cell wall( GO:0009531 )
anchored to membrane( GO:0031225 )
cytoplasmic membrane-bounded vesicle( GO:0016023 )
Trait Ontology stem strength( TO:0000051 )
node shattering( TO:0000061 )
plant height( TO:0000207 )
root thickness( TO:0000306 )
root development trait( TO:0000656 )
auxin sensitivity( TO:0000163 )
Plant Ontology stem( PO:0009047 )
leaf sheath( PO:0020104 )
root( PO:0009005 )
reproductive shoot system( PO:0025082 )
root development stage( PO:0007520 )
lateral root primordium( PO:0000016 )
inflorescence( PO:0009049 )
Related Strains
Stocks for Genes 1
F Lines 7
Backcross Fn Generation (T65) 2
Phenotype images
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Photo from A. Yoshimura
Last updated
Sep 5, 2022

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