Update info.Gene - Detail
Detail of Gene
Click here for feedback| Basic Information | |||
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| CGSNL Gene Symbol | BC3 | ||
| Gene Symbol Synonym | bc3, bc-3, OsDRP2B, DRP2B | ||
| CGSNL Gene Name | BRITTLE CULM 3 | ||
| Gene Name Synonym | brittle culm3, brittle culm 3, brittle culm-3, dynamin-related protein 2B | ||
| Protein Name | DYNAMIN-RELATED PROTEIN 2B | ||
| Allele | |||
| Chromosome No. | 2 | ||
| Explanation | A brittle or soft culm. Rather short height and imperfect emergence of panicles. The brittleness of culm and panicle axis of this mutant is not so distinct as that of bc1 and bc2. [132] PO:0009047; stem ; PO:0009049; inflorescence. GRO:0007048; 04-stem elongation stage ; GRO:0007148; 05-booting stage ; GRO:0007044; 06-heading stage. GO:0072583: clathrin-dependent endocytosis. | ||
| Trait Class |
Vegetative organ - Culm
Vegetative organ - Root |
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| Expression | |||
| Sequence/Locus | |||
| cDNA Accession No. |
AK099699
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| MSU ID |
LOC_Os02g50550.1
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| RAP ID |
Os02g0738900 |
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| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
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INSD Accession List (Test version) |
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| Map | |||
| Locate(cM) | 172.0 | ||
| Link map | Classical linkage map | ||
| References | |||
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Kawai T., Akahoshi R., Shelley I.J., Kojima T., Sato M., Tsuji H., Inukai Y.
Front Plant Sci 2022 13 834378 Auxin Distribution in Lateral Root Primordium Development Affects the Size and Lateral Root Diameter of Rice.
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Wu B., Zhang B., Dai Y., Zhang L., Shang-Guan K., Peng Y., Zhou Y., Zhu Z.
Plant Physiol. 2012 159(4) 1440-52 Brittle culm15 encodes a membrane-associated chitinase-like protein required for cellulose biosynthesis in rice.
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Hirano K., Kotake T., Kamihara K., Tsuna K., Aohara T., Kaneko Y., Takatsuji H., Tsumuraya Y., Kawasaki S.
Planta. 2010 232 95-108 Rice BRITTLE CULM 3 (BC3) encodes a classical dynamin OsDRP2B essential for proper secondary cell wall synthesis
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Xiong G,Li R,Qian Q,Song X,Liu X,Yu Y,Zeng D,Wan J,Li J,Zhou Y
Plant J. 2010 64(1) 56-70 The rice dynamin-related protein DRP2B mediates membrane trafficking and thereby plays a critical role in secondary cell wall cellulose biosynthesis.
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Iwata, N., H. Satoh and A. Yoshimura
RGN 1989 6 106-108. Linkage map for Nishimura's chromosome 8.
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Iwata, N. and T. Omura
Jpn. J. Genet. 1984 59(3) 199-204. Studies on the trisomics in rice plants (Oryza sativa L.). VI. An accomplishment of a trisomic series in japonica rice plants.
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Iwata, N. and T. Omura
J. Fac. Agr. Kyushu Univ. 1977 21 117-127. Linkage studies in rice (Oryza sativa L.). On some mutants derived from chronic gamma irradiation.
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| DB Reference | |||
| Gramene ID | GR:0060070 | ||
| Ontologies | |||
| Gene Ontology |
lateral root formation( GO:0010311 )
lateral root development( GO:0048527 ) auxin mediated signaling pathway( GO:0009734 ) response to auxin stimulus( GO:0009733 ) GTP binding( GO:0005525 ) secondary cell wall biogenesis( GO:0009834 ) lignin metabolic process( GO:0009808 ) plasma membrane( GO:0005886 ) GTPase activity( GO:0003924 ) endocytosis( GO:0006897 ) trans-Golgi network( GO:0005802 ) clathrin-coated endocytic vesicle( GO:0045334 ) secondary cell wall( GO:0009531 ) anchored to membrane( GO:0031225 ) cytoplasmic membrane-bounded vesicle( GO:0016023 ) |
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| Trait Ontology |
stem strength( TO:0000051 )
node shattering( TO:0000061 ) plant height( TO:0000207 ) root thickness( TO:0000306 ) root development trait( TO:0000656 ) auxin sensitivity( TO:0000163 ) |
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| Plant Ontology |
stem( PO:0009047 )
leaf sheath( PO:0020104 ) root( PO:0009005 ) reproductive shoot system( PO:0025082 ) root development stage( PO:0007520 ) lateral root primordium( PO:0000016 ) inflorescence( PO:0009049 ) |
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| Related Strains | |||
| Stocks for Genes | 1 | ||
| F Lines | 7 | ||
| Backcross Fn Generation (T65) | 2 | ||
| Phenotype images | |||
Click to full size image in new window
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| Last updated | |||
| Sep 5, 2022 | |||
