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Basic Information
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CGSNL Gene Symbol
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SBI
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Gene Symbol Synonym
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GA2OX4, OsGA2ox4, ga2ox 4, OsGA2ox-4, OsSBI
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CGSNL Gene Name
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SHORTENED BASAL INTERNODES
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Gene Name Synonym
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rice GA 2-oxidase4, GA 2-oxidase 4, Gibberellin 2-oxidase 4
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Protein Name
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GIBBERELLIN 2-OXIDASE 4
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Allele
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SBISV14, SBIZhu1S
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Chromosome No.
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5
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Explanation
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This gene encodes one of the GA metabolic enzymes, GA 2-oxidase (GA2ox), being located on chromosome 5 at 106cM. EU179387-EU179391 (wild rice species). MF574209 (SBISV14), MF574210 (SBIZhu1S). a semi-dominant gene.
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Trait Class
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Biochemical character
Vegetative organ - Culm
Tolerance and resistance - Stress tolerance
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK107211
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MSU ID
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LOC_Os05g43880.1
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RAP ID
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Os05g0514600
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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Link to INSD Accession List
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Wang H., Chen M., Zhang D., Meng X., Yan J., Chu J., Li J., Yu H.
Plant Biotechnol. J. 2024 22(3) 532-534
Shaping rice Green Revolution traits by engineering ATG immediate upstream 5'-UTR sequences of OsSBI and OsHTD1.
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Song J., Ga E., Park S., Lee H., Yoon I.S., Lee S.B., Lee J.Y., Kim B.G.
Int J Mol Sci 2023 24(13)
PROTEIN PHOSPHATASE 2C08, a Negative Regulator of Abscisic Acid Signaling, Promotes Internode Elongation in Rice.
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Prakash S., Rai R., Zamzam M., Ahmad O., Peesapati R., Vijayraghavan U.
Front Plant Sci 2022 13 865928
OsbZIP47 Is an Integrator for Meristem Regulators During Rice Plant Growth and Development.
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Hsieh K.T., Chen Y.T., Hu T.J., Lin S.M., Hsieh C.H., Liu S.H., Shiue S.Y., Lo S.F., Wang I.W., Tseng C.S., Chen L.J.
Rice (N Y) 2021 14(1) 70
Comparisons within the Rice GA 2-Oxidase Gene Family Revealed Three Dominant Paralogs and a Functional Attenuated Gene that Led to the Identification of Four Amino Acid Variants Associated with GA Deactivation Capability.
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Li R., Jiang M., Song Y., Zhang H.
Front Plant Sci 2021 12 727596
Melatonin Alleviates Low-Temperature Stress <i>via</i> ABI5-Mediated Signals During Seed Germination in Rice (<i>Oryza sativa</i> L.).
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Wang Y., Du F., Wang J., Li Y., Zhang Y., Zhao X., Zheng T., Li Z., Xu J., Wang W., Fu B.
Int J Mol Sci 2021 22(17)
Molecular Dissection of the Gene <i>OsGA2ox8</i> Conferring Osmotic Stress Tolerance in Rice.
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Liu C., Zheng S., Gui J., Fu C., Yu H., Song D., Shen J., Qin P., Liu X., Han B., Yang Y., Li L.
Mol Plant 2018 11(2) 288-299
Shortened Basal Internodes Encodes a Gibberellin 2-Oxidase and Contributes to Lodging Resistance in Rice.
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Zhou W., Malabanan P.B., Abrigo E.
Euphytica 2014 201 97-107
OsHox4 regulates GA signaling by interacting with DELLA-like genes and GA oxidase genes in rice
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Hirose F., Inagaki N., Takano M.
Plant Signal Behav 2013 8(3)
Differences and similarities in the photoregulation of gibberellin metabolism between rice and dicots.
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Hirose F., Inagaki N., Hanada A., Yamaguchi S., Kamiya Y., Miyao A., Hirochika H., Takano M.
Plant Cell Physiol. 2012 53(9) 1570-82
Cryptochrome and Phytochrome Cooperatively but Independently Reduce Active Gibberellin Content in Rice Seedlings under Light Irradiation.
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Yang,Y.H., Zhang,F.M. and Ge,S.
BMC Evol. Biol. 2009 9 206
Evolutionary rate patterns of the Gibberellin pathway genes
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Sakamoto, T., K. Miura, H. Itoh, T. Tatsumi, M. Ueguchi-Tanaka, K. Ishiyama, M. Kobayashi, G.K. Agrawal, S. Takeda, K. Abe, A. Miyao, H. Hirochika, H. Kitano, M. Ashikari and M. Matsuoka
Plant Physiol. 2004 134 1642-1653
An overview of gibberellin metabolism enzyme genes and their related mutants in rice.
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TextPresso Search
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Search textpresso for SBI
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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GR:0020080
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Ontologies
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Gene Ontology
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response to hormone stimulus( GO:0009725 )
response to cold( GO:0009409 )
gibberellin metabolic process( GO:0009685 )
cytoplasmic membrane-bounded vesicle( GO:0016023 )
secretion by cell( GO:0032940 )
internode patterning( GO:0080006 )
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Trait Ontology
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lodging incidence( TO:0000068 )
plant height( TO:0000207 )
internode length( TO:0000145 )
cold tolerance( TO:0000303 )
plant growth hormone sensitivity( TO:0000401 )
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Plant Ontology
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shoot internode( PO:0005005 )
stem( PO:0009047 )
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Related Strains
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Phenotype images
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Last updated
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May 15, 2024
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