Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol GA2OX3
Gene Symbol Synonym OsGA2ox3, ga2ox 3, OsGA2ox-3, GA2ox3, GA2ox-3, GA2ox4
CGSNL Gene Name GIBBERELLIN 2-OXIDASE 3
Gene Name Synonym rice GA 2-oxidase3, GA 2-oxidase 3, Gibberellin 2-oxidase 3
Protein Name GIBBERELLIN 2-OXIDASE 3
Allele
Chromosome No. 1
Explanation This gene encodes one of the GA metabolic enzymes, GA 2-oxidase (GA2ox), being located on chromosome 1 at 130.1cM. GA2ox4 in Mimura et al. 2012.
Trait Class Biochemical character
Vegetative organ - Culm
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK101713
MSU ID LOC_Os01g55240.1
RAP ID Os01g0757200
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Guo F., Zhang P., Wu Y., Lian G., Yang Z., Liu W., Buerte B., Zhou C., Zhang W., Li D., Han N., Tong Z., Zhu M., Xu L., Chen M., Bian H.
Front Plant Sci 2022  13  887980
Rice LEAFY COTYLEDON1 Hinders Embryo Greening During the Seed Development.
Yang B., Chen M., Zhan C., Liu K., Cheng Y., Xie T., Zhu P., He Y., Zeng P., Tang H., Tsugama D., Chen S., Zhang H., Cheng J.
J. Exp. Bot. 2022   
Identification of OsPK5 involved in rice glycolytic metabolism and GA/ABA balance for improving seed germination via GWAS.
Farooq M., Khan M.A., Zhao D.D., Asif S., Kim E.G., Jang Y.H., Park J.R., Lee I.J., Kim K.M.
Front Plant Sci 2022  13  1041181
Extrinsic role of gibberellin mitigating salinity effect in different rice genotypes.
Li R., Jiang M., Song Y., Zhang H.
Front Plant Sci 2021  12  727596
Melatonin Alleviates Low-Temperature Stress <i>via</i> ABI5-Mediated Signals During Seed Germination in Rice (<i>Oryza sativa</i> L.).
He Y., Zhu M., Li Z., Jiang S., He Z., Xu S., Chen X., Hu Z., Zhang Z.
Int J Mol Sci 2021  22(12) 
<i>IPA1</i> Negatively Regulates Early Rice Seedling Development by Interfering with Starch Metabolism via the GA and <i>WRKY</i> Pathways.
Hsieh K.T., Chen Y.T., Hu T.J., Lin S.M., Hsieh C.H., Liu S.H., Shiue S.Y., Lo S.F., Wang I.W., Tseng C.S., Chen L.J.
Rice (N Y) 2021  14(1)  70
Comparisons within the Rice GA 2-Oxidase Gene Family Revealed Three Dominant Paralogs and a Functional Attenuated Gene that Led to the Identification of Four Amino Acid Variants Associated with GA Deactivation Capability.
Tang L., Xu H., Wang Y., Wang H., Li Z., Liu X., Shu Y., Li G., Liu W., Ying J., Tong X., Yao J., Xiao W., Tang S., Ni S., Zhang J.
Int J Mol Sci 2021  22(22) 
OsABF1 Represses Gibberellin Biosynthesis to Regulate plant height and Seed Germination in Rice (<i>Oryza sativa</i> L.).
Wang Y., Du F., Wang J., Li Y., Zhang Y., Zhao X., Zheng T., Li Z., Xu J., Wang W., Fu B.
Int J Mol Sci 2021  22(17) 
Molecular Dissection of the Gene <i>OsGA2ox8</i> Conferring Osmotic Stress Tolerance in Rice.
Ji H., Han C.D., Lee G.S., Jung K.H., Kang D.Y., Oh J., Oh H., Cheon K.S., Kim S.L., Choi I., Baek J., Kim K.H.
Rice (N Y) 2019  12(1)  62
Mutations in the microRNA172 binding site of SUPERNUMERARY BRACT (SNB) suppress internode elongation in rice.
Liu L., Xia W., Li H., Zeng H., Wei B., Han S., Yin C.
Front Plant Sci 2018  9  275
Salinity Inhibits Rice Seed Germination by Reducing alpha-amylase Activity via Decreased Bioactive Gibberellin Content.
Wang J., Wang R., Wang Y., Zhang L., Zhang L., Xu Y., Yao S.
Plant J. 2017   
SHORT and Solid Culm/RFL/APO2 for culm development in rice.
Xiao Y., Liu D., Zhang G., Tong H., Chu C.
Front Plant Sci 2017  8  1698
Brassinosteroids Regulate OFP1, a DLT interacting protein, to Modulate Plant Architecture and Grain Morphology in Rice.
Ma X., Feng F., Wei H., Mei H., Xu K., Chen S., Li T., Liang X., Liu H., Luo L.
Front Plant Sci 2016  7  1801
Genome-Wide Association Study for plant height and grain yield in Rice under Contrasting Moisture Regimes.
Zhou W., Malabanan P.B., Abrigo E.
Euphytica 2014  201  97-107
OsHox4 regulates GA signaling by interacting with DELLA-like genes and GA oxidase genes in rice
Tong H.a, Xiao Y.a, Liu D.a, Gao S.a, Liu L.a, Yin Y.b, Jin Y.c, Qian Q.d, Chu C.a
Plant Cell 2014  26  4376-4393
Brassinosteroid regulates cell elongation by modulating gibberellin metabolism in ricec w open
Guo X., Hou X., Fang J., Wei P., Xu B., Chen M., Feng Y., Chu C.
Plant J. 2013  75(3)  403-16
The rice GERMINATION DEFECTIVE1, encoding a B3 domain transcriptional repressor, regulates seed germination and seedling development by integrating GA and carbohydrate metabolism.
Hirose F., Inagaki N., Hanada A., Yamaguchi S., Kamiya Y., Miyao A., Hirochika H., Takano M.
Plant Cell Physiol. 2012  53(9)  1570-82
Cryptochrome and Phytochrome Cooperatively but Independently Reduce Active Gibberellin Content in Rice Seedlings under Light Irradiation.
Mimura M., Nagato Y., Itoh J.I.
Planta 2012  235(5)  1081-9
Rice PLASTOCHRON genes regulate leaf maturation downstream of the gibberellin signal transduction pathway.
Liu Y,Xu Y,Xiao J,Ma Q,Li D,Xue Z,Chong K
J. Plant Physiol. 2011  168(10)  1098-105
OsDOG, a gibberellin-induced A20/AN1 zinc-finger protein, negatively regulates gibberellin-mediated cell elongation in rice.
Tang X., Zhang Z.-Y., Zhang W.-J., Zhao X.-M., Li X., Zhang D., Liu Q.-Q., Tang W.-H.
Plant Physiol. 2010  154(4)  1855-1870
Global gene profiling of laser-captured pollen mother cells indicates molecular pathways and gene subfamilies involved in rice meiosis.
Yamaguchi S.
Annual Review of Plant Biology 2008  59  225-51
Gibberellin metabolism and its regulation.
Hirose,N., Makita,N., Kojima,M., Kamada-Nobusada,T. and Sakakibara,H.
Plant Cell Physiol. 2007  48(3)  523-539
Overexpression of a type-a response regulator alters rice morphology and cytokinin metabolism.
Sakamoto, T., K. Miura, H. Itoh, T. Tatsumi, M. Ueguchi-Tanaka, K. Ishiyama, M. Kobayashi, G.K. Agrawal, S. Takeda, K. Abe, A. Miyao, H. Hirochika, H. Kitano, M. Ashikari and M. Matsuoka
Plant Physiol. 2004  134  1642-1653
An overview of gibberellin metabolism enzyme genes and their related mutants in rice.
Sakai M., Saito T., Kobayashi M., Tanaka H., Matsuoka M., Sakamoto T.
Journal of plant research 2003  116(2)  161-4
Expression of novel rice gibberellin 2-oxidase gene is under homeostatic regulation by biologically active gibberellins.
TextPresso Search Search textpresso for GA2OX3 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0020079
Ontologies
Gene Ontology response to hormone stimulus( GO:0009725 )
response to cold( GO:0009409 )
response to salt stress( GO:0009651 )
gibberellin metabolic process( GO:0009685 )
response to brassinosteroid stimulus( GO:0009741 )
brassinosteroid mediated signaling( GO:0009742 )
negative regulation of gibberellic acid mediated signaling( GO:0009938 )
Trait Ontology brassinosteroid sensitivity( TO:0002677 )
plant height( TO:0000207 )
salt tolerance( TO:0006001 )
cold tolerance( TO:0000303 )
plant growth hormone sensitivity( TO:0000401 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Feb 13, 2023


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