Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol GA2OX1
Gene Symbol Synonym OsGA2ox1, ga2ox-1, OsGA2ox-1, ga2ox, ga2ox 1, GA2ox1
Gene Name Synonym rice GA 2-oxidase1, GA 2-oxidase 1, Gibberellin 2-oxidase 1
Chromosome No. 5
Explanation This gene encodes one of the GA metabolic enzymes, GA 2-oxidase (GA2ox), being located on chromosome 5 at 29.1cM. AB059416, BAB40934
Trait Class Biochemical character
Vegetative organ - Culm
Tolerance and resistance - Stress tolerance
cDNA Accession No. AK120967
MSU ID LOC_Os05g06670.1
RAP ID Os05g0158600
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Link map Classical linkage map
Zhang Y., Gan L., Zhang Y., Huang B., Wan B., Li J., Tong L., Zhou X., Wei Z., Li Y., Song Z., Zhang X., Cai D., He Y.
Plant J. 2023   
OsCBL5-CIPK1-pp23 module enhances rice grain size and weight through the gibberellin pathway.
Farooq M., Khan M.A., Zhao D.D., Asif S., Kim E.G., Jang Y.H., Park J.R., Lee I.J., Kim K.M.
Front Plant Sci 2022  13  1041181
Extrinsic role of gibberellin mitigating salinity effect in different rice genotypes.
Um T.Y., Hong S.Y., Han J.S., Jung K.H., Moon S., Choi B.S., Basnet P., Chung Y.S., Lee S.W., Yang W.T., Kim D.H.
Front Plant Sci 2022  13  1027688
<i>Gibberellic acid sensitive dwarf</i> encodes an ARPC2 subunit that mediates gibberellic acid biosynthesis, effects to grain yield in rice.
Yang B., Chen M., Zhan C., Liu K., Cheng Y., Xie T., Zhu P., He Y., Zeng P., Tang H., Tsugama D., Chen S., Zhang H., Cheng J.
J. Exp. Bot. 2022   
Identification of OsPK5 involved in rice glycolytic metabolism and GA/ABA balance for improving seed germination via GWAS.
Hsieh K.T., Chen Y.T., Hu T.J., Lin S.M., Hsieh C.H., Liu S.H., Shiue S.Y., Lo S.F., Wang I.W., Tseng C.S., Chen L.J.
Rice (N Y) 2021  14(1)  70
Comparisons within the Rice GA 2-Oxidase Gene Family Revealed Three Dominant Paralogs and a Functional Attenuated Gene that Led to the Identification of Four Amino Acid Variants Associated with GA Deactivation Capability.
Li R., Jiang M., Song Y., Zhang H.
Front Plant Sci 2021  12  727596
Melatonin Alleviates Low-Temperature Stress <i>via</i> ABI5-Mediated Signals During Seed Germination in Rice (<i>Oryza sativa</i> L.).
Tang L., Xu H., Wang Y., Wang H., Li Z., Liu X., Shu Y., Li G., Liu W., Ying J., Tong X., Yao J., Xiao W., Tang S., Ni S., Zhang J.
Int J Mol Sci 2021  22(22) 
OsABF1 Represses Gibberellin Biosynthesis to Regulate plant height and Seed Germination in Rice (<i>Oryza sativa</i> L.).
Lee J., Moon S., Jang S., Lee S., An G., Jung K.H., Park S.K.
Plants (Basel) 2020  9(4) 
<i>OsbHLH073</i> Negatively Regulates Internode Elongation and plant height by Modulating GA Homeostasis in Rice.
Liu L., Xia W., Li H., Zeng H., Wei B., Han S., Yin C.
Front Plant Sci 2018  9  275
Salinity Inhibits Rice Seed Germination by Reducing alpha-amylase Activity via Decreased Bioactive Gibberellin Content.
Xie Y., Zhang Y., Han J., Luo J., Li G., Huang J., Wu H., Tian Q., Zhu Q., Chen Y., Kawano Y., Liu Y.G., Chen L.
Mol Plant 2018  11(5)  720-735
The Intronic cis Element SE1 Recruits trans-Acting Repressor Complexes to Repress the Expression of ELONGATED UPPERMOST INTERNODE1 in Rice.
Uji Y., Taniguchi S., Tamaoki D., Shishido H., Akimitsu K., Gomi K.
Plant Cell Physiol. 2016   
Overexpression of OsMYC2 Results in the Up-Regulation of Early JA-Rresponsive Genes and Bacterial Blight Resistance in Rice.
Du W., Cheng J., Cheng Y., Wang L., He Y., Wang Z., Zhang H.
Plant Biol (Stuttg) 2015   
Physiological characteristics and related gene expression of after-ripening on seed dormancy release in rice.
Liu G., Zhang K., Ai J., Su Y., Deng X., Hong Y., Wang X.
J. Exp. Bot. 2015   
Patatin-related phospholipase A, pPLAIIIalpha, modulates the longitudinal growth of vegetative tissues and seeds in rice.
Zhang C.C., Yuan W.Y., Zhang Q.F.
Mol Plant 2012  5(2)  482-93
RPL1, a Gene Involved in Epigenetic Processes Regulates Phenotypic Plasticity in Rice.
Hirose F., Inagaki N., Hanada A., Yamaguchi S., Kamiya Y., Miyao A., Hirochika H., Takano M.
Plant Cell Physiol. 2012  53(9)  1570-82
Cryptochrome and Phytochrome Cooperatively but Independently Reduce Active Gibberellin Content in Rice Seedlings under Light Irradiation.
Liu Y,Xu Y,Xiao J,Ma Q,Li D,Xue Z,Chong K
J. Plant Physiol. 2011  168(10)  1098-105
OsDOG, a gibberellin-induced A20/AN1 zinc-finger protein, negatively regulates gibberellin-mediated cell elongation in rice.
Tang X., Zhang Z.-Y., Zhang W.-J., Zhao X.-M., Li X., Zhang D., Liu Q.-Q., Tang W.-H.
Plant Physiol. 2010  154(4)  1855-1870
Global gene profiling of laser-captured pollen mother cells indicates molecular pathways and gene subfamilies involved in rice meiosis.
Yamaguchi S.
Annual Review of Plant Biology 2008  59  225-51
Gibberellin metabolism and its regulation.
Lo SF, Yang SY, Chen KT, Hsing YI, Zeevaart JA, Chen LJ, Yu SM.
The Plant Cell 2008  20(10)  2603-18
A novel class of gibberellin 2-oxidases control semidwarfism, tillering, and root development in rice.
Lee DJ, Zeevaart JA.
Plant physiology 2005  138(1)  243-54
Molecular cloning of GA 2-oxidase3 from spinach and its ectopic expression in Nicotiana sylvestris.
Sakamoto, T., K. Miura, H. Itoh, T. Tatsumi, M. Ueguchi-Tanaka, K. Ishiyama, M. Kobayashi, G.K. Agrawal, S. Takeda, K. Abe, A. Miyao, H. Hirochika, H. Kitano, M. Ashikari and M. Matsuoka
Plant Physiol. 2004  134  1642-1653
An overview of gibberellin metabolism enzyme genes and their related mutants in rice.
Sakai M., Saito T., Kobayashi M., Tanaka H., Matsuoka M., Sakamoto T.
Journal of plant research 2003  116(2)  161-4
Expression of novel rice gibberellin 2-oxidase gene is under homeostatic regulation by biologically active gibberellins.
Sakamoto,T., Kobayashi,M., Itoh,H., Tagiri,A., Kayano,T., Tanaka,H., Iwahori,S. and Matsuoka,M.
Plant Physiol. 2001  125(3)  1508-1516
Expression of a gibberellin 2-oxidase gene around the shoot apex is related to phase transition in rice.
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DB Reference
Gramene ID GR:0020077
Gene Ontology antibiotic biosynthetic process( GO:0017000 )
isopenicillin-N synthase activity( GO:0016216 )
gibberellin metabolic process( GO:0009685 )
response to gibberellin stimulus( GO:0009739 )
response to salt stress( GO:0009651 )
response to hormone stimulus( GO:0009725 )
response to cold( GO:0009409 )
iron ion binding( GO:0005506 )
Trait Ontology plant height( TO:0000207 )
cold tolerance( TO:0000303 )
plant growth hormone sensitivity( TO:0000401 )
salt tolerance( TO:0006001 )
gibberellic acid sensitivity( TO:0000166 )
Plant Ontology -
Related Strains
Phenotype images
Last updated
Sep 28, 2023