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Basic Information
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CGSNL Gene Symbol
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PRL5
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Gene Symbol Synonym
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OsGA20ox4, ga20ox4, GA20ox2, Prl5, Prl5/GA20ox4, OsPrl5
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CGSNL Gene Name
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PANICLE RACHIS LENGTH 5
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Gene Name Synonym
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rice GA 20-oxidase4, GA 20-oxidase 4, gibberellin C-20 oxidase 4, Putative gibberellin 20-dioxygenase 4, PANICLE RACHIS LENGTH5
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Protein Name
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GIBBERELLIN 20-OXIDASE 4
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Allele
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Prl5-ST-1
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Chromosome No.
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5
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Explanation
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This gene encodes one of the GA metabolic enzymes, GA 20-oxidase (GA20ox), being located on chromosome 5 at 80.3cM. Putative gibberellin 20-dioxygenase. GRO:0007047; 02-seedling ; GRO:0007139; A-vegetative stage ; GRO:0007040; rice growth stage. CB660961. GA20ox2 in Yuan et al. 2019. GSE151043. TO:0000847: panicle inflorescence morphology trait. PO:0030123: panicle inflorescence. TO:0000784: inflorescence branch morphology trait. likely related to drought and salt stress(Whankaew et al. 2020).
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Trait Class
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Biochemical character
Reproductive organ - panicle
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Expression
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Sequence/Locus
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cDNA Accession No.
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-
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MSU ID
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LOC_Os05g34854.1
LOC_Os05g34854.2
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RAP ID
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Os05g0421900
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Agata A., Ando K., Ota S., Kojima M., Takebayashi Y., Takehara S., Doi K., Ueguchi-Tanaka M., Suzuki T., Sakakibara H., Matsuoka M., Ashikari M., Inukai Y., Kitano H., Hobo T.
Commun Biol 2020 3(1) 302
Diverse panicle architecture results from various combinations of Prl5/GA20ox4 and Pbl6/APO1 alleles.
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Whankaew S., Kaewmanee S., Ruttajorn K., Phongdara A.
Physiol Mol Biol Plants 2020 26(6) 1237-1247
Indel marker analysis of putative stress-related genes reveals genetic diversity and differentiation of rice landraces in peninsular Thailand.
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Ma Z., Wu T., Huang K., Jin Y.M., Li Z., Chen M., Yun S., Zhang H., Yang X., Chen H., Bai H., Du L., Ju S., Guo L., Bian M., Hu L., Du X., Jiang W.
Front Plant Sci 2020 11 709
A Novel AP2/ERF Transcription Factor, OsRPH1, Negatively Regulates plant height in Rice.
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Yuan S., Kim S.C., Deng X., Hong Y., Wang X.
New Phytol. 2019 223(1) 261-276
Diacylglycerol kinase and associated lipid mediators modulate rice root architecture.
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Hirose F., Inagaki N., Takano M.
Plant Signal Behav 2013 8(3)
Differences and similarities in the photoregulation of gibberellin metabolism between rice and dicots.
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Hirose F., Inagaki N., Hanada A., Yamaguchi S., Kamiya Y., Miyao A., Hirochika H., Takano M.
Plant Cell Physiol. 2012 53(9) 1570-82
Cryptochrome and Phytochrome Cooperatively but Independently Reduce Active Gibberellin Content in Rice Seedlings under Light Irradiation.
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Tang X., Zhang Z.-Y., Zhang W.-J., Zhao X.-M., Li X., Zhang D., Liu Q.-Q., Tang W.-H.
Plant Physiol. 2010 154(4) 1855-1870
Global gene profiling of laser-captured pollen mother cells indicates molecular pathways and gene subfamilies involved in rice meiosis.
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Yamaguchi S.
Annual Review of Plant Biology 2008 59 225-51
Gibberellin metabolism and its regulation.
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Hirose,N., Makita,N., Kojima,M., Kamada-Nobusada,T. and Sakakibara,H.
Plant Cell Physiol. 2007 48(3) 523-539
Overexpression of a type-a response regulator alters rice morphology and cytokinin metabolism.
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Sakamoto, T., K. Miura, H. Itoh, T. Tatsumi, M. Ueguchi-Tanaka, K. Ishiyama, M. Kobayashi, G.K. Agrawal, S. Takeda, K. Abe, A. Miyao, H. Hirochika, H. Kitano, M. Ashikari and M. Matsuoka
Plant Physiol. 2004 134 1642-1653
An overview of gibberellin metabolism enzyme genes and their related mutants in rice.
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TextPresso Search
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Search textpresso for PRL5
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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GR:0020082
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Ontologies
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Gene Ontology
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proteolysis( GO:0006508 )
iron ion binding( GO:0005506 )
metallocarboxypeptidase activity( GO:0004181 )
antibiotic biosynthetic process( GO:0017000 )
oxidoreductase activity( GO:0016491 )
isopenicillin-N synthase activity( GO:0016216 )
gibberellin metabolic process( GO:0009685 )
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Trait Ontology
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enzyme activity( TO:0000599 )
growth and development trait( TO:0000357 )
panicle length( TO:0000040 )
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Plant Ontology
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-
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Related Strains
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Phenotype images
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Last updated
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Nov 30, 2021
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