Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol GH2
Gene Symbol Synonym gh2, CAD2, CAD, OsCAD2, GH2
CGSNL Gene Name GOLD HULL AND INTERNODE 2
Gene Name Synonym gold hull and internode2, gold hull and internode-2, Cinnamyl alcohol dehydrogenase 2, Sinapyl alcohol dehydrogenase, Protein GOLD HULL AND INTERNODE 2, Cinnamyl alcohol dehydrogenase
Protein Name CINNAMYL ALCOHOL DEHYDROGENASE 2
Allele gh2, gh2-1
Chromosome No. 2
Explanation This mutant exhibits brownish green lemma and palea at panicle exsertion and deep golden yellow at maturity. This mutant also shows golden-colored internode (Yellow pigment is accumulated at cell wall). LOC_Os02g09490. Q6ZHS4. GRO:0007142; 1-4 leaf stage ; GRO:0007044; 06-heading stage ; GRO:0007042; 08-dough stage ; GRO:0007045; 09-mature grain stage ; GRO:0007046; 07-milk stage. GO:1901698: response to nitrogen compound.
Trait Class Biochemical character
Vegetative organ - Culm
Coloration - Others
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK105011
RAP ID Os02g0187800
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM) 20.0
Link map Classical linkage map
References
Huang P., Yoshida H., Yano K., Kinoshita S., Kawai K., Koketsu E., Hattori M., Takehara S., Huang J., Hirano K., Ordonio R.L., Matsuoka M., Ueguchi-Tanaka M.
J Integr Plant Biol 2017   
OsIDD2, a zinc finger and INDETERMINATE DOMAIN protein, regulates secondary cell wall formation.
Wu L., Zhang W., Ding Y., Zhang J., Cambula E.D., Weng F., Liu Z., Ding C., Tang S., Chen L., Wang S., Li G.
Front Plant Sci 2017  8  881
Shading Contributes to the Reduction of Stem Mechanical Strength by Decreasing Cell Wall Synthesis in Japonica Rice (Oryza sativa L.).
Zhang W., Wu L., Ding Y., Yao X., Wu X., Weng F., Li G., Liu Z., Tang S., Ding C., Wang S.
J. Plant Res. 2017   
Nitrogen fertilizer application affects lodging resistance by altering secondary cell wall synthesis in japonica rice (Oryza sativa).
Zhao S., Zhao L., Liu F., Wu Y., Zhu Z., Sun C., Tan L.
J Integr Plant Biol 2016  58(12)  983-996
NARROW AND ROLLED LEAF 2 regulates leaf shape, male fertility, and seed size in rice.
Noda S., Koshiba T., Hattori T., Yamaguchi M., Suzuki S., Umezawa T.
Planta 2015  242(3)  589-600
The expression of a rice secondary wall-specific cellulose synthase gene, OsCesA7, is directly regulated by a rice transcription factor, OsMYB58/63.
Hirano K., Kondo M., Aya K., Miyao A., Sato Y., Antonio B.A., Namiki N., Nagamura Y., Matsuoka M.
Plant Cell Physiol. 2013  54(11)  1791-802
Identification of transcription factors involved in rice secondary cell wall formation.
Koshiba T.a, Hirose N.a, Mukai M.a, Yamamura M.a, Hattori T.a d, Suzuki S.a, Sakamoto M.b, Umezawa T.a c
Plant Biotechnology 2013  30  157-167
Characterization of 5-hydroxyconiferaldehyde O-methyltransferase in Oryza sativa
Hirano K., Aya K., Kondo M., Okuno A., Morinaka Y., Matsuoka M.
Plant Cell Rep. 2012  31(1)  91-101
OsCAD2 is the major CAD gene responsible for monolignol biosynthesis in rice culm.
Huang,J., Zhang,K., Shen,Y., Huang,Z., Li,M., Tang,D., Gu,M. and Cheng,Z.
Genomics 2009  93(3)  274-281
Identification of a high frequency transposon induced by tissue culture, nDaiZ, a member of the hAT family in rice
Zhang,K., Qian,Q., Huang,Z., Wang,Y., Li,M., Hong,L., Zeng,D., Gu,M., Chu,C. and Cheng,Z.
Plant Physiol. 2006  140(3)  972-983
GOLD HULL AND INTERNODE2 Encodes a Primarily Multifunctional Cinnamyl-Alcohol Dehydrogenase in Rice
Tobias,C.M. and Chow,E.K.
Planta. 2005  220 (5)  678-688
Structure of the cinnamyl-alcohol dehydrogenase gene family in rice and promoter activity of a member associated with lignification
Sanchez, A.C. and G.S. Khush
J. Hered. 1994  85  297-300.
Chromosomal location of some marker genes in rice using the primary trisomics.
Iwata, N., H. Satoh and A. Yoshimura
RGN 1989  6  106-108.
Linkage map for Nishimura's chromosome 8.
Iwata, N. and T. Omura
Jpn. J. Genet. 1984  59(3)  199-204.
Studies on the trisomics in rice plants (Oryza sativa L.). VI. An accomplishment of a trisomic series in japonica rice plants.
Iwata, N., T. Omura and H. Satoh
Japan. J. Breed. 1978  28(Suppl. 1)  170-171.
Linkage studies in rice. The sequence of genes at the eight and eleventh linkage groups.
Iwata, N., T. Omura and H. Satoh
J. Fac. Agr. Kyushu Univ. 1978  22  243-251.
Linkage studies in rice (Oryza sativa L.). On some mutants for physiological leaf spots.
Iwata, N. and T. Omura
Sci. Bull. Fac. Agr. Kyushu Univ. 1971  25(3.4)  137-153.
Linkage analysis by reciprocal translocation method in rice plants (Oryza sativa L).II. Linkage groups corresponding to the chromosomes 5, 6, 8, 9, 10 and 11.
TextPresso Search Search textpresso for GH2 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0060366
Ontologies
Gene Ontology zinc ion binding( GO:0008270 )
electron carrier activity( GO:0009055 )
response to light intensity( GO:0009642 )
lignin metabolic process( GO:0009808 )
lignin biosynthetic process( GO:0009809 )
secondary cell wall biogenesis( GO:0009834 )
heme binding( GO:0020037 )
electron transport chain( GO:0022900 )
cinnamyl-alcohol dehydrogenase activity( GO:0045551 )
oxidation reduction( GO:0055114 )
Trait Ontology lignin monomer content( TO:0000732 )
internode color( TO:0000426 )
"seed coat color" or "internode color"( TO:0000190 or TO:0000426 )
lemma and palea color( TO:0000264 )
lignin biosynthesis trait( TO:0000733 )
nitrogen sensitivity( TO:0000011 )
stem strength( TO:0000051 )
light intensity sensitivity( TO:0000460 )
Plant Ontology leaf vascular system( PO:0000036 )
shoot axis vascular system( PO:0000039 )
root vascular system( PO:0003011 )
root( PO:0009005 )
seed( PO:0009010 )
inflorescence( PO:0009049 )
leaf sheath( PO:0020104 )
stem internode( PO:0020142 )
Related Strains
Stocks for Genes 1
F Lines 15
Backcross Fn Generation (T65) 1
Phenotype images
Click to full size image in new window
Photo from A. Yoshimura
Last updated
2018-01-07 17:19:35.931


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