遺伝子 - 詳細

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詳細 - 遺伝子

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Basic Information

CGSNL 遺伝子シンボル

GH2

遺伝子シンボルシノニム

gh2, CAD2, CAD, OsCAD2, OsGH2

CGSNL 遺伝子名

GOLD HULL AND INTERNODE 2

遺伝子名シノニム

穎節間黄金色2

タンパク質名

CINNAMYL ALCOHOL DEHYDROGENASE 2

対立遺伝子

gh2, gh2-1

染色体番号

解説

出穂期の内穎と外穎が茶緑色を呈し，成熟すると濃い黄金色となる．また節間部が黄色になる（細胞壁に黄色の色素を持つ）。 Q6ZHS4. GRO:0007142; 1-4 leaf stage ; GRO:0007044; 06-heading stage ; GRO:0007042; 08-dough stage ; GRO:0007045; 09-mature grain stage ; GRO:0007046; 07-milk stage. GO:1901698: response to nitrogen compound. PO:0030123: panicle inflorescence. TO:0000930: seed shattering.

形質クラス

生化学的性質
栄養器官 - 稈
着色 - その他
種子 - 生理的な特色 - 脱粒性
耐性、抵抗性 - 病気抵抗性
耐性、抵抗性 - ストレス耐性

発現

Sequence/Locus

cDNA Accession No.

AK105011

MSU ID

LOC_Os02g09490.1

RAP ID

Os02g0187800

Links

Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )

INSD Accession List
(Test version)

Link to INSD Accession List

マップ

位置情報(cM)

20.0

リンケージマップ

Classical linkage map

文献

Ning J., He W., Wu L., Chang L., Hu M., Fu Y., Liu F., Sun H., Gu P., Ndjiondjop M.N., Sun C., Zhu Z.
Plant Biotechnol. J. 2023 21(5) 931-942

The MYB transcription factor Seed Shattering 11 controls seed Shattering by repressing lignin synthesis in African rice.

Chen Z., Teng S., Liu D., Chang Y., Zhang L., Cui X., Wu J., Ai P., Sun X., Lu T., Zhang Z.
Front Plant Sci 2022 13 905111

RLM1, Encoding an R2R3 MYB Transcription Factor, Regulates the Development of Secondary Cell Wall in Rice.

Ma J., Morel J.B., Riemann M., Nick P.
BMC Plant Biol. 2022 22(1) 601

Jasmonic acid contributes to rice resistance against Magnaporthe oryzae.

Liu Y., Zhang W., Wang Y., Xie L., Zhang Q., Zhang J., Li W., Wu M., Cui J., Wang W., Zhang Z.
Front Plant Sci 2022 13 1054917

<i>Nudix hydrolase 14</i> influences plant development and grain chalkiness in rice.

Chen H., Fang R., Deng R., Li J.
Plant Biotechnol. J. 2021

The OsmiRNA166b-OsHox32 pair regulates mechanical strength of rice plants by modulating cell wall biosynthesis.

Zhao K., Lin F., Romero-Gamboa SP., Saha P., Goh H.J., An G., Jung K.H., Hazen S.P., Bartley L.E.
Front Plant Sci 2019 10 1275

Rice Genome-Scale Network Integration Reveals Transcriptional Regulators of Grass Cell Wall Synthesis.

Miyamoto T., Takada R., Tobimatsu Y., Takeda Y., Suzuki S., Yamamura M., Osakabe K., Osakabe Y., Sakamoto M., Umezawa T.
Plant J. 2019 98(6) 975-987

OsMYB108 loss-of-function enriches p-coumaroylated and tricin lignin units in rice cell walls.

Ke S., Luan X., Liang J., Hung Y.H., Hsieh T.F., Zhang X.Q.
Plant Mol. Biol. 2019 100(1-2) 151-161

Rice OsPEX1, an extensin-like protein, affects lignin biosynthesis and plant growth.

Sánchez-Sanuy F., Peris-Peris C., Tomiyama S., Okada K., Hsing Y.I., San Segundo B., Campo S.
BMC Plant Biol. 2019 19(1) 563

Osa-miR7695 enhances transcriptional priming in defense responses against the rice blast fungus.

Park H.L., Kim T.L., Bhoo S.H., Lee T.H., Lee S.W., Cho M.H.
Molecules 2018 23(10)

Biochemical Characterization of the Rice Cinnamyl Alcohol Dehydrogenase Gene Family.

Zhang W., Wu L., Ding Y., Yao X., Wu X., Weng F., Li G., Liu Z., Tang S., Ding C., Wang S.
J. Plant Res. 2017

Nitrogen fertilizer application affects lodging resistance by altering secondary cell wall synthesis in japonica rice (Oryza sativa).

Wu L., Zhang W., Ding Y., Zhang J., Cambula E.D., Weng F., Liu Z., Ding C., Tang S., Chen L., Wang S., Li G.
Front Plant Sci 2017 8 881

Shading Contributes to the Reduction of Stem Mechanical Strength by Decreasing Cell Wall Synthesis in Japonica Rice (Oryza sativa L.).

Huang P., Yoshida H., Yano K., Kinoshita S., Kawai K., Koketsu E., Hattori M., Takehara S., Huang J., Hirano K., Ordonio R.L., Matsuoka M., Ueguchi-Tanaka M.
J Integr Plant Biol 2017

OsIDD2, a zinc finger and INDETERMINATE DOMAIN protein, regulates secondary cell wall formation.

Zhao S., Zhao L., Liu F., Wu Y., Zhu Z., Sun C., Tan L.
J Integr Plant Biol 2016 58(12) 983-996

NARROW AND ROLLED LEAF 2 regulates leaf shape, male fertility, and seed size in rice.

Noda S., Koshiba T., Hattori T., Yamaguchi M., Suzuki S., Umezawa T.
Planta 2015 242(3) 589-600

The expression of a rice secondary wall-specific cellulose synthase gene, OsCesA7, is directly regulated by a rice transcription factor, OsMYB58/63.

Koshiba T.a, Hirose N.a, Mukai M.a, Yamamura M.a, Hattori T.a d, Suzuki S.a, Sakamoto M.b, Umezawa T.a c
Plant Biotechnology 2013 30 157-167

Characterization of 5-hydroxyconiferaldehyde O-methyltransferase in Oryza sativa

Hirano K., Kondo M., Aya K., Miyao A., Sato Y., Antonio B.A., Namiki N., Nagamura Y., Matsuoka M.
Plant Cell Physiol. 2013 54(11) 1791-802

Identification of transcription factors involved in rice secondary cell wall formation.

Hirano K., Aya K., Kondo M., Okuno A., Morinaka Y., Matsuoka M.
Plant Cell Rep. 2012 31(1) 91-101

OsCAD2 is the major CAD gene responsible for monolignol biosynthesis in rice culm.

Madana M R Ambavaram, Krishnan A., Kurniawan R Trijatmiko, Pereira A.
Plant Physiol. 2011 155(2) 916-31

Coordinated activation of cellulose and repression of lignin biosynthesis pathways in rice.

Huang,J., Zhang,K., Shen,Y., Huang,Z., Li,M., Tang,D., Gu,M. and Cheng,Z.
Genomics 2009 93(3) 274-281

Identification of a high frequency transposon induced by tissue culture, nDaiZ, a member of the hAT family in rice

Zhang,K., Qian,Q., Huang,Z., Wang,Y., Li,M., Hong,L., Zeng,D., Gu,M., Chu,C. and Cheng,Z.
Plant Physiol. 2006 140(3) 972-983

GOLD HULL AND INTERNODE2 Encodes a Primarily Multifunctional Cinnamyl-Alcohol Dehydrogenase in Rice

Tobias,C.M. and Chow,E.K.
Planta. 2005 220 (5) 678-688

Structure of the cinnamyl-alcohol dehydrogenase gene family in rice and promoter activity of a member associated with lignification

Sanchez, A.C. and G.S. Khush
J. Hered. 1994 85 297-300.

Chromosomal location of some marker genes in rice using the primary trisomics.

Iwata, N., H. Satoh and A. Yoshimura
RGN 1989 6 106-108.

Linkage map for Nishimura's chromosome 8.

Iwata, N. and T. Omura
Jpn. J. Genet. 1984 59(3) 199-204.

Studies on the trisomics in rice plants (Oryza sativa L.). VI. An accomplishment of a trisomic series in japonica rice plants.

Iwata, N., T. Omura and H. Satoh
Japan. J. Breed. 1978 28(Suppl. 1) 170-171.

Linkage studies in rice. The sequence of genes at the eight and eleventh linkage groups.

Iwata, N., T. Omura and H. Satoh
J. Fac. Agr. Kyushu Univ. 1978 22 243-251.

Linkage studies in rice (Oryza sativa L.). On some mutants for physiological leaf spots.

Iwata, N. and T. Omura
Sci. Bull. Fac. Agr. Kyushu Univ. 1971 25(3.4) 137-153.

Linkage analysis by reciprocal translocation method in rice plants (Oryza sativa L).II. Linkage groups corresponding to the chromosomes 5, 6, 8, 9, 10 and 11.

TextPresso Search

Search textpresso for GH2 ( Recent references may be retrievable, but without any warranty )

DB Reference

Gramene ID

GR:0060366

オントロジー

Gene Ontology

zinc ion binding( GO:0008270 )
lignin biosynthetic process( GO:0009809 )
heme binding( GO:0020037 )
electron transport chain( GO:0022900 )
cinnamyl-alcohol dehydrogenase activity( GO:0045551 )
lignin metabolic process( GO:0009808 )
electron carrier activity( GO:0009055 )
oxidation reduction( GO:0055114 )
secondary cell wall biogenesis( GO:0009834 )
response to light intensity( GO:0009642 )
response to UV( GO:0009411 )
defense response to bacterium( GO:0042742 )

Trait Ontology

lignin monomer content( TO:0000732 )
internode color( TO:0000426 )
"seed coat color" or "internode color"( TO:0000190_TO:0000426 )
lemma and palea color( TO:0000264 )
lignin biosynthesis trait( TO:0000733 )
nitrogen sensitivity( TO:0000011 )
stem strength( TO:0000051 )
light intensity sensitivity( TO:0000460 )
UV light sensitivity( TO:0000160 )
bacterial blight disease resistance( TO:0000175 )
fruit senescing quality trait( TO:0002729 )
grain shattering( TO:0000473 )

Plant Ontology

leaf vascular system( PO:0000036 )
shoot axis vascular system( PO:0000039 )
root vascular system( PO:0003011 )
root( PO:0009005 )
seed( PO:0009010 )
inflorescence( PO:0009049 )
leaf sheath( PO:0020104 )
stem internode( PO:0020142 )
stem( PO:0009047 )

Rice Database Oryzabase

遺伝子 - 詳細

詳細 - 遺伝子