Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol PIB
Gene Symbol Synonym Pi b(Pi s), Pis, Pib, Pi-s, Pi-hy
Gene Name Synonym Pyricularia oryzae resistance-b, Magnaporthe grisea resistance-b, Blast resistance b
Protein Name
Chromosome No. 2
Explanation AB013448, AB013449. AB026839. PO:0009047; stem ; PO:0020141; stem node ; PO:0009049; inflorescence ; PO:0009025; leaf. GRO:0007044; 06-heading stage ; GRO:0007042; 08-dough stage ; GRO:0007046; 07-milk stage ; GRO:0007048; 04-stem elongation stage ; GRO:0007047; 02-seedling ; GRO:0007049; 03-tillering stage ; GRO:0007148; 05-booting stage ; GRO:0007045; 09-mature grain stage. Original line is Tohoku IL9 (Japonica). EF642422-EF642443 (O. sativa, O. rufipogon, O. nivara).
Trait Class Tolerance and resistance - Disease resistance
cDNA Accession No. -
Links -
INSD Accession List
(Test version)
Link to INSD Accession List
Locate(cM) 154.1
Link map Classical linkage map
Reinke R., Kim S.M., Kim B.K.
Mol. Genet. Genomics 2018  293(6)  1565-1575
Developing japonica rice introgression lines with multiple resistance genes for brown planthopper, bacterial blight, rice blast, and rice stripe virus using molecular breeding.
Yadav M.K., S A., Ngangkham U., Shubudhi H.N., Bag M.K., Adak T., Munda S., Samantaray S., Jena M.
PLoS ONE 2017  12(4)  e0176236
Use of molecular markers in identification and characterization of resistance to rice blast in India.
Imam J.a b, Alam S.a, Mandal N.P.a, Variar M.a, Shukla P.b
Euphytica 2014  196  199-211
Molecular screening for identification of blast resistance genes in North East and Eastern Indian rice germplasm (Oryza sativa L.) with PCR based makers
Miah G., Rafii M.Y., R .Ismail M., B. Puteh A., A. Rahim H., Asfaliza R., A. Latif M.
Mol. Biol. Rep. 2013  40(3)  2369-88
Blast resistance in rice: a review of conventional breeding to molecular approaches
Gupta S.K., Rai A.K., Kanwar S.S., Sharma T.R.
PLoS ONE 2012  7(8)  e42578
Comparative analysis of zinc finger proteins involved in plant disease resistance.
Roychowdhury M., Jia Y., Jia M.H., Fjellstrom R., Cartwright R.D.
Phytopathology 2012  102(7)  700-6
Identification of the rice blast resistance gene Pib in the National Small Grains Collection.
Luo,S., Zhang,Y., Hu,Q., Chen,J., Li,K., Lu,C., Liu,H., Wang,W. and Kuang,H.
Plant Physiol. 2012  159(1)  197-210
Dynamic Nucleotide-Binding-Site and Leucine-Rich-Repeat- encoding Genes in the Grass Family
Chen J.
Thesis, Fujian Agriculture and Forestry University, China 2011    -
Fine Mapping and Map-based Cloning of a Blast-resistance Gene Pi-y43(t) from Japonica Rice Yunyin
Li Y., Xia Q., Kou H., Wang D., Lin X., Wu Y., Xu C., Xing S., Liu B.
J Integr Plant Biol 2011  53(10)  814-823
Induced Pib Expression and Resistance to Magnaporthe grisea are Compromised by Cytosine Demethylation at Critical Promoter Regions in Rice.
Koide Y., Kobayashi N., Xu D., Fukuta Y.
JARQ 2009  43  255-280
Resistance Genes and Selection DNA Markers for Blast Disease in Rice (Oryza sativa L.)
Zhang,Y., Wang,J., Zhang,X., Chen,J.Q., Tian,D. and Yang,S.
J. Mol. Evol. 2009  68(4)  393-402
Genetic signature of rice domestication shown by a variety of genes
Soon-Wook Kwon, Young-Chan Cho, Yeon-Gyu Kim, Jung-Pil Suh, Ji-Ung Jeung, Jae-Hwan Roh, Sang-Kyu Lee, Jong-Seong Jeon, Sae-Jun Yang, Young-Tae Lee
Mol. Cells 2008  25(3)  407-16
Development of near-isogenic Japonica rice lines with enhanced resistance to Magnaporthe grisea.
Zhou M., Shi-Hu Yang, Lan Y., Yu-Kuan Jin, Jian-Min Wan
Yi Chuan 2008  30(3)  367-72
[Initial functional analysis of the promoter region and coding region of Pib gene in transgenic rice].
Ballini E., Morel J.B., Droc G., Price A., Courtois B., Notteghem J.L., Tharreau D.
Mol. Plant Microbe Interact. 2008  21(7)  859-68
A genome-wide meta-analysis of rice blast resistance genes and quantitative trait loci provides new insights into partial and complete resistance.
Kishine M., Nakamura S., Matsukura U., Ohtsubo K.
Biosci. Biotechnol. Biochem. 2008  72(10)  2767-9
Cultivar identification of Korean rice based on DNA markers for blast resistance.
Yang,S., Gu,T., Pan,C., Feng,Z., Ding,J., Hang,Y., Chen,J.Q. and Tian,D.
Theor. Appl. Genet. 2008  116(2)  165-177
Genetic variation of NBS-LRR class resistance genes in rice lines
Lin,F., Chen,S., Que,Z., Wang,L., Liu,X. and Pan,Q.
Genetics 2007  177(3)  1871-1880
The Blast Resistance Gene Pi37 Encodes a Nucleotide Binding Site-Leucine-Rich Repeat Protein and Is a Member of a Resistance Gene Cluster on Rice Chromosome 1
Cho Y.C., Kwon S.W., Choi I.S., Lee S.K., Jeon J.S., Oh M.K., Roh J.H., Hwang H.G., Yang S.J., Kim Y.G.
J. Crop Sci. Biotech. 2007  10  265-276
Identification of Major Blast Resistance Genes in Korean Rice Varieties (Oryza sativa L.) Using Molecular Markers
Hayashi K, Yoshida H, Ashikawa I.
Theor. Appl. Genet. 2006  113(2)  251-260
Development of PCR-based allele-specific and InDel marker sets for nine rice blast resistance genes.
Kim H.K., Lee S.K., Cho J.I., Lee S., An G., Jwa N.S., Kim B.R., Cho Y.C., Han S.S., Bhoo S.H., Lee Y.H., Hong Y.K., Yi G., Park D.S., Hahn T.R., Jeon J.S.
Mol. Cells 2005  20(3)  385-91
Characterization of rice mutants with enhanced susceptibility to rice blast.
Wu JL, Fan YY, Li DB, Zheng KL, Leung H, Zhuang JY.
Theor. Appl. Genet. 2005  111(1)  50-56
Genetic control of rice blast resistance in the durably resistant cultivar Gumei 2 against multiple isolates.
Yokoo M.
JARQ 2005  39  239-245
Introduction of Piz-t and Pib Genes for Blast Disease Resistance from Indica Varieties and their Utilization for Genetic Researches in Rice
Zhou J.H., Wang J.L., Xu J.C., Klei C.L., Ling Z.Z.
Plant Pathol. 2004  53  191-196
Identification and mapping of a rice blast resistance gene Pi-g(t) in the cultivar Guangchangzhan
Robert Fjellstrom, Concetta A. Conaway-Bormans, Anna M. McClung, Marco A. Marchetti, A. obert Shank and William D. Park
Crop Sci. 2004  44  1790-1798
Development of DNA Markers Suitable for Marker Assisted Selection of Three Pi Genes Conferring esistance to Multiple Pyricularia grisea Pathotypes
Sallaud, C., M. Lorieux, E. Roumen, D Tharreau, R. Berruyer, P. Svestasrani, O. Garsmeur, A. Ghesquiere, J.L. Nottenghem
Theor. Appl. Genet. 2003  106  794-803
Identification of five new blast resistance genes in the highly blast-resistant rice variety IR64 using a QTL mapping strategy.
Ramalingam J, Vera Cruz C, Kukreja K, Chittoorr JM, Wu JL, Lee SW, Baraoidan M, George ML, Cohen MB, Hulbert SH, Leach JE, Leung H.
Mol. Plant Microbe Interact. 2003  16(1)  14-24
Candidate defense genes from rice, barley, and maize and their association with qualitative and quantitative resistance in rice.
Wang,Z.X., Yamanouchi,U., Katayose,Y., Sasaki,T. and Yano,M.
Plant Mol. Biol. 2001  47(5)  653-661
Expression of the Pib rice-blast-resistance gene family is up-regulated by environmental conditions favouring infection and by chemical signals that trigger secondary plant defences.
Tabien,R.E., Li-Z, Paterson,A.H., Marchetti,M.A., Stansel,J.W., Pinson,S.R.M.
Theoretical and Applied Genetics 2000  101  1215-1225
Mapping of four major rice blast resistance genes from 'Lemont'and 'Teqing' and evaluation of their combinatorial effect for field resistance
Wang,Z.X., Yano,M., Yamanouchi,U., Iwamoto,M., Monna,L., Hayasaka,H., Katayose,Y. and Sasaki,T.
Plant J. 1999  19(1)  55-64
The Pib gene for rice blast resistance belongs to the nucleotide binding and leucine-rich repeat class of plant disease resistance genes.
Tsunoda, Y., N.-S. Jwa, T. Motomura, K. Kamihara, S. Nakamura, H. Onodera, M. Ugaki, K. Akiyama, O. Kodama and S. Kawasaki
Breeding Science 1998  48(Suppl. 2)  20
Trial on screening and identification of the rice blast resistance gene Pi-b due to the complimentation test.
Nakamura, S., S. Asakawa, N. Ohmido, K. Fukui, N. Shimizu and S. Kawasaki
Mol. Gen. Genet. 1997  254  611-620.
Construction of an 800-kb contig in the near-centromeric region of the rice blast resistance gene Pi-ta2 using a highly representative rice BAC library.
Imbe, T., S. Oba, M.J.T. Yanoria and H. Tsunematsu
RGN 1997  14  60-62.
A new gene for blast resistance in rice cultivar, IR24.
Tsunoda, Y., S. Nakamura, N-S. Jwa, N. Sasaki, Y. Okabe, O. Kodama and S. Kawasaki
Breeding Science 1997  47(Suppl. 2)  7
Characterization of cDNAs in the region of rice blast resistance gene Pi-b.
Monna, L., A. Miyao, H.S. Zhong, M. Yano, M. Iwamoto, Y. Umehara, N. Kurata, H. Hayasaka and T. Sasaki
Theor. Appl. Genet. 1997  94  170-176.
Saturation mapping with subclones of YACs DNA marker production targeting the rice blast disease resistance gene, Pi-b.
Kawasaki, S., S. Nakamura, T. Suzuki, I. Wisniewska, N. Sasaki, H. Seki and K. Shinozaki
Breeding Science 1997  47(Suppl. 1)  36
Delineation of rice blast resistance gene Pi-b region on a BAC contig spanning flanking markers and a trial of cDNA search within the region.
Iwamoto, M., Y. Kuboki, L. Monna, H. Hayasaka, M. Yano, K. Matsunaga and T. Sasaki
Breeding Science 1996  46(Suppl. 1)  91
Fine scale linkage mapping of a blast resistance gene Pi-b using pooled-sampling method.
Nakamura, H., Y. Toukairin, S. Hidaka, S. Ejiri and K. Tsutsumi
Breeding Science 1996  46(Suppl. 2)  326
Genomic polymorphysm at the cytoplasmic aldolase-encoding loci and their different expression in rice varieties.
Miyamoto, M., I. Ando, K. Rybka, O. Kodama and S. Kawasaki
Mol. Plant Microbe Interact. 1996  9  6-13.
High resolution mapping of the indica-derived rice blast resistance genes.I. Pi-b.
Kawasaki, S., K. Rybka, M. Miyamoto, Y. Tanaka, M. Kataoka, A. Saito and I. Ando
Rice Genetics III. IRRI, Manila, Philippines. 1996    675-680.
Positional cloning of rice blast resistance genes.
Rybka, K., M. Miyamoto, K. Akiyama, S. Nakamura, N. Sasaki, I. Ando and S. Kawasaki
Breeding Science 1995  45(Suppl. 2)  169
Physical mapping of a rice blast resistance gene Pi-b.
Hayasaka, H., T. Shimano, K. Ebana, Y. Nagamura, M. Yano, T. Sasaki, and K. Matsunaga
Breeding Science 1995  45(Suppl. 1)  92
RELP mapping of a rice blast resistance gene Pi-b.
Miyamoto, M., M. Saito, I. Ando, O. Kamada, T. Akatuka and S. Kawasaki
Japan. J. Breed. 1993  43(Suppl 2)  220
High resolution mapping of rice blast resistance gene Pi-b.
Satoh, M., M. Miyamoto, I. Andoh, A. Saito and S. Kawasaki
Japan. J. Breed. 1992  42(Suppl. 2)  132-133.
RFLP mapping of resistance genes against rice blast disease I. Pi-b and Pi-z.
Ling Z., Wang J., Pan Q., Li M., Huang Q., Qiu Z.
Scientia Agricultura Sinica 1990  23  5-11
Classification for blast resistance of some Japonica type varieties from Yunnan province
Yokoo M., Kikuchi F., Fujimaki H., Nagai K.
Japan. J. Breed. 1978  28  359-385
Breeding of blast resistance lines (BL1 to 7) from Indica-Japonica crosses of rice
Kiyosawa, S.
Japan. J. Breed. 1978  28(4)  287-296.
Identification of blast-resistance genes in some varieties.
Kiyosawa S.
Oryza (Cuttack) 1976  13  1-32
Methods for tests and gene analyses of blast resistance of rice varieties.
Kiyosawa, S.
Symposium on Rice Breeding, IRRI, Los Banos, Philippines. 1972    203-225.
Genetics of blast resistance.
Shinoda, H., K. Toriyama, T. Yunoki, A. Ezuka and Y. Sakurai
Bull. Chugoku Agric. Exp. Stn., Ser.A 1971  20  1-25.
Studies on the varietal resistance of rice to blast. 6. Linkage relationship of blast resistance genes.
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DB Reference
Gramene ID GR:0060613
Gene Ontology response to fungus( GO:0009620 )
defense response( GO:0006952 )
ADP binding( GO:0043531 )
Trait Ontology leaf blast disease resistance( TO:0000468 )
panicle blast disease resistance( TO:0000477 )
penetrated root length( TO:0000508 )
Plant Ontology vascular leaf( PO:0009025 )
stem( PO:0009047 )
inflorescence( PO:0009049 )
stem node( PO:0020141 )
Related Strains
Phenotype images
Last updated
May 4, 2019

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