Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol SHR1
Gene Symbol Synonym shr1, sh1, shr
CGSNL Gene Name SHRUNKEN ENDOSPERM 1
Gene Name Synonym shrunken endosperm1, shrunken endosperm 1, shrunken eudosperm-1, shrunken
Protein Name
Allele shr1-s, shr1-a, shr
Chromosome No. 1
Explanation Endosperm is wrinkled, opaque and brittle [597]. The endosperm is stained blue-black by I-KI solution [440] PO:0009089; endosperm. GRO:0007045; 09-mature grain stage. The starch mutant shrunken contains reduced activities of cytosolic ADP-glucose pyrophosphorylase (Kawagoe et al. 2005).
Trait Class Seed - Morphological traits - Endosperm
Seed - Physiological traits - Storage substances
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID -
RAP ID -
Links -
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM) 64.0
Link map Classical linkage map
References
Kawagoe Y., Kubo A., Satoh H., Takaiwa F., Nakamura Y.
Plant J. 2005  42(2)  164-74
Roles of isoamylase and ADP-glucose pyrophosphorylase in starch granule synthesis in rice endosperm.
Matsuo, T., M. Yano, H. Satoh and T. Omura
RGN 1986  3  60-61.
Location of gene shr-1 on chromosome 3.
Yano, M., Y. Isono, H. Satoh and T. Omura
Japan. J. Breed. 1984  34(1)  43-49.
Gene analysis of sugary and shrunken mutants of rice, Oryza sativa L.
Satoh, H. and T. Omura
Japan. J. Breed. 1981  31(3)  316-326.
New endosperm mutations induced by chemical mutagen in rice, Oryza sativa L.
TextPresso Search Search textpresso for SHR1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0060891
Ontologies
Gene Ontology amyloplast starch grain( GO:0009568 )
Trait Ontology shrunken endosperm( TO:0000100 )
chalky endosperm( TO:0000266 )
endosperm quality( TO:0000587 )
starch grain synthesis( TO:0002658 )
starch grain size( TO:0002655 )
Plant Ontology endosperm( PO:0009089 )
Related Strains
Stocks for Genes 1
F Lines 1
Phenotype images
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Last updated
Jun 3, 2016


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