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Basic Information
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CGSNL 遺伝子シンボル
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D2
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遺伝子シンボルシノニム
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d2, dwf2, CYP90D2, D2/CYP90D2, OsD2, SMG11, OsSMG11, D2/SMG11, OsD2a, OsD2b
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CGSNL 遺伝子名
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DWARF EBISU
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遺伝子名シノニム
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夷（えびす), ebisu dwarf, dwarf-2, cytochrome P450 CYP90D2, Ebisu dwarf/Dwarf2, Dwarf2, SMALL GRAIN 11, cytochrome P450 D2
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タンパク質名
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C-23 HYDROXYLASE
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対立遺伝子
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d2, d2-1, d2-2, d2-3, smg11
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染色体番号
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1
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解説
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AP003244. Q94IW5. 茎と葉の形状は大黒矮性に似るが，籾の形状はほぼ正常。TO:0000847: panicle anatomy and morphology trait. GO:0030307: positive regulation of cell growth. TO:0000789: bud morphology trait. qLTG1 (QTL for low-temperature germinability) candidate.
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形質クラス
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QTLの特性 - 発芽
栄養器官 - 葉
栄養器官 - 稈
種子 - 形態学的な特色 - 粒形
耐性、抵抗性 - 病気抵抗性
耐性、抵抗性 - ストレス耐性
QTLの特性 - 収穫と生産性
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発現
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Sequence/Locus
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cDNA Accession No.
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-
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MSU ID
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LOC_Os01g10040.1
LOC_Os01g10040.2
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RAP ID
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Os01g0197100
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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Link to INSD Accession List
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マップ
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位置情報(cM)
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リンケージマップ
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Classical linkage map
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文献
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Ma M., Shen S.Y., Bai C., Wang W.Q., Feng X.H., Ying J.Z., Song X.J.
Cell Rep 2023 42(3) 112187
Control of grain size in rice by TGW3 phosphorylation of OsIAA10 through potentiation of OsIAA10-OsARF4-mediated auxin signaling.
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Ling C., Wang X., Li Z., He Y., Li Y.
Int J Mol Sci 2022 23(21)
Effects and Mechanism of Enhanced UV-B Radiation on the flag leaf Angle of Rice.
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Kim S.H., Shim K.C., Lee H.S., Jeon Y.A., Adeva C., Luong N.H., Ahn S.N.
Front Plant Sci 2022 13 985559
Brassinosteroid biosynthesis gene <i>OsD2</i> is associated with low-temperature germinability in rice.
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Hwang O.J., Back K.
Antioxidants (Basel) 2022 11(5)
Molecular Regulation of Antioxidant Melatonin Biosynthesis by Brassinosteroid Acting as an Endogenous Elicitor of Melatonin Induction in Rice Seedlings.
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Tian P., Liu J., Yan B., Li S., Lei B., Shen R., Lei C., Xu M.
Plants (Basel) 2022 11(12)
OsBSK3 Positively Regulates Grain Length and Weight by Inhibiting the phosphatase activity of OsPPKL1.
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Tian X., He M., Mei E., Zhang B., Tang J., Xu M., Liu J., Li X., Wang Z., Tang W., Guan Q., Bu Q.
Plant Cell 2021
WRKY53 Integrates Classic Brassinosteroid Signaling and the Mitogen-Activated Protein Kinase Pathway to Regulate Rice Architecture and seed size.
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Chun Y., Fang J., Zafar S.A., Shang J., Zhao J., Yuan S., Li X.
Rice (N Y) 2020 13(1) 7
MINI SEED 2 (MIS2) Encodes a Receptor-like Kinase that Controls grain size and Shape in Rice.
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Seo H., Kim S.H., Lee B.D., Lim J.H., Lee S.J., An G., Paek N.C.
Int J Mol Sci 2020 21(6)
The Rice <i>Basic Helix-Loop-Helix 79</i> (<i>OsbHLH079</i>) Determines leaf angle and Grain Shape.
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Xiao Y., Zhang G., Liu D., Niu M., Tong H., Chu C.
Plant J. 2020
GSK2 stabilizes OFP3 to suppress brassinosteroid responses in rice.
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Gao X., Zhang J.Q., Zhang X., Zhou J., Jiang Z., Huang P., Tang Z., Bao Y., Cheng J., Tang H., Zhang W., Zhang H., Huang J.
Plant Cell 2019 31(5) 1077-1093
Rice qGL3/OsPPKL1 Functions with the GSK3/SHAGGY-Like Kinase OsGSK3 to Modulate Brassinosteroid Signaling.
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Yang C., Ma Y., He Y., Tian Z., Li J.
Plant J. 2018 93(3) 489-501
OsOFP19 modulates plant architecture by integrating the cell division pattern and brassinosteroid signaling.
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Yuan P., Zhang C., Wang Z.Y., Zhu X.F., Xuan Y.H.
Phytopathology 2018 108(9) 1104-1113
RAVL1 Activates Brassinosteroids and Ethylene Signaling to Modulate Response to Sheath Blight Disease in Rice.
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Qin R., Zeng D., Yang C., Akhter D., Alamin M., Jin X., Shi C.
Genes (Basel) 2018 9(6)
<i>LTBSG1</i>, a New Allele of <i>BRD2</i>, Regulates Panicle and Grain Development in Rice by Brassinosteroid Biosynthetic Pathway.
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Zhu X.F., Yuan P., Zhang C., Li T.Y., Xuan Y.H.
Plant Biotechnol. J. 2018 16(8) 1399-1401
RAVL1, an upstream component of brassinosteroid signalling and biosynthesis, regulates ethylene signalling via activation of EIL1 in rice.
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Sun S., Wang T., Wang L., Li X., Jia Y., Liu C., Huang X., Xie W., Wang X.
Nat Commun 2018 9(1) 2523
Natural selection of a GSK3 determines rice mesocotyl domestication by coordinating strigolactone and brassinosteroid signaling.
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Yu H., Ruan B., Wang Z., Ren D., Zhang Y., Leng Y., Zeng D., Hu J., Zhang G., Zhu L., Gao Z., Chen G., Guo L., Chen W., Qian Q.
Front Plant Sci 2017 8 486
Fine Mapping of a Novel defective glume 1 (dg1) Mutant, Which Affects Vegetative and Spikelet Development in Rice.
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Segami S., Takehara K., Yamamoto T., Kido S., Kondo S., Iwasaki Y., Miura K.
Breed. Sci. 2017 67(4) 393-397
Overexpression of SRS5 improves grain size of brassinosteroid-related dwarf mutants in rice (Oryza sativa L.).
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Xiao Y., Liu D., Zhang G., Tong H., Chu C.
Front Plant Sci 2017 8 1698
Brassinosteroids Regulate OFP1, a DLT interacting protein, to Modulate Plant Architecture and Grain Morphology in Rice.
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Yuan H., Fan S., Huang J., Zhan S., Wang S., Gao P., Chen W., Tu B., Ma B., Wang Y., Qin P., Li S.
Rice (N Y) 2017 10(1) 25
08SG2/OsBAK1 regulates grain size and number, and functions differently in Indica and Japonica backgrounds in rice.
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Qiao S., Sun S., Wang L., Wu Z., Li C., Li X., Wang T., Leng L., Tian W., Lu T., Wang X.
Plant Cell 2017 29(2) 292-309
The RLA1/SMOS1 Transcription Factor Functions with OsBZR1 to Regulate Brassinosteroid Signaling and Rice Architecture.
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He Y., Zhang H., Sun Z., Li J., Hong G., Zhu Q., Zhou X., MacFarlane S., Yan F., Chen J.
New Phytol. 2016
Jasmonic acid-mediated defense suppresses brassinosteroid-mediated susceptibility to Rice black streaked dwarf virus infection in rice.
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Yang C., Shen W., He Y., Tian Z., Li J.
PLoS Genet. 2016 12(6) e1006118
OVATE Family Protein 8 Positively Mediates Brassinosteroid Signaling through Interacting with the GSK3-like Kinase in Rice.
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Feng Z., Wu C., Wang C., Roh J., Zhang L., Chen J., Zhang S., Zhang H., Yang C., Hu J., You X., Liu X., Yang X., Guo X., Zhang X., Wu F., Terzaghi W., Kim S.K., Jiang L., Wan J.
J. Exp. Bot. 2016 67(14) 4241-53
SLG controls grain size and leaf angle by modulating brassinosteroid homeostasis in rice.
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Dong H., Zhao H., Xie W., Han Z., Li G., Yao W., Bai X., Hu Y., Guo Z., Lu K., Yang L., Xing Y.
PLoS Genet. 2016 12(11) e1006412
A Novel tiller angle Gene, TAC3, together with TAC1 and D2 Largely Determine the Natural Variation of tiller angle in Rice Cultivars.
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Fang N., Xu R., Huang L., Zhang B., Duan P., Li N., Luo Y., Li Y.
Rice (N Y) 2016 9(1) 64
SMALL GRAIN 11 Controls grain size, Grain Number and grain yield in Rice.
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Zhang X., Sun J., Cao X., Song X.
Plant Physiol. 2015 169(3) 2118-28
Epigenetic Mutation of RAV6 Affects leaf angle and Seed Size in Rice.
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Gan L., Wu H., Wu D., Zhang Z., Guo Z., Yang N., Xia K., Zhou X., Oh K., Matsuoka M., Ng D., Zhu C.
Plant Sci. 2015 241 238-45
Methyl jasmonate inhibits lamina joint inclination by repressing brassinosteroid biosynthesis and signaling in rice.
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Zhang B., Wang X., Zhao Z., Wang R., Huang X., Zhu Y., Yuan L., Wang Y., Xu X., Burlingame A.L., Gao Y., Sun Y., Tang W.
Plant Physiol. 2015
OsBRI1 activates BR signaling by preventing binding between the TPR and kinase domains of OsBSK3 via phosphorylation.
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Chen Q., Xie Q., Gao J., Wang W., Sun B., Liu B., Zhu H., Peng H., Zhao H., Liu C., Wang J., Zhang J., Zhang G., Zhang Z.
J. Exp. Bot. 2015
Characterization of Rolled and Erect Leaf 1 in regulating leave morphology in rice.
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Tong H.a, Xiao Y.a, Liu D.a, Gao S.a, Liu L.a, Yin Y.b, Jin Y.c, Qian Q.d, Chu C.a
Plant Cell 2014 26 4376-4393
Brassinosteroid regulates cell elongation by modulating gibberellin metabolism in ricec w open
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Zhang C., Bai M.Y., Chong K.
Plant Cell Rep. 2014 33(5) 683-96
Brassinosteroid-mediated regulation of agronomic traits in rice.
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Sakamoto T., Kitano H., Fujioka S.
Plant Signal Behav 2013 8 e27117
An E3 ubiquitin ligase, ERECT LEAF1, functions in brassinosteroid signaling of rice.
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Tong H., Liu L., Jin Y., Du L., Yin Y., Qian Q., Zhu L., Chu C.
Plant Cell 2012 24(6) 2562-77
DWARF AND LOW-TILLERING Acts as a Direct Downstream Target of a GSK3/SHAGGY-like kinase to Mediate Brassinosteroid Responses in Rice.
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Je B.I., Piao H.L., Park S.J., Park S.H., Kim C.M., Xuan Y.H., Park S.H., Huang J., Do Choi Y., An G., Wong H.L., Fujioka S., Kim M.-C., Shimamoto K., Han C.-D.
Plant Cell 2010 22(6) 1777-1791
RAV-Like1 maintains brassinosteroid homeostasis via the coordinated activation of BRI1 and biosynthetic genes in rice.
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Tong H,Jin Y,Liu W,Li F,Fang J,Yin Y,Qian Q,Zhu L,Chu C
Plant J. 2009 58 803-16
DWARF AND LOW-TILLERING, a new member of the GRAS family, plays positive roles in brassinosteroid signaling in rice.
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Li D., Wang L., Wang M., Yun-Yuan Xu, Luo W., Ya-Ju Liu, Zhi-Hong Xu, Li J., Chong K.
Plant Biotechnol. J. 2009 7(8) 791-806
Engineering OsBAK1 gene as a molecular tool to improve rice architecture for high yield.
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Nakamura A,Fujioka S,Takatsuto S,Tsujimoto M,Kitano H,Yoshida S,Asami T,Nakano T
Plant Cell Physiol. 2009 50(9) 1627-35
Involvement of C-22-hydroxylated brassinosteroids in auxin-induced lamina joint bending in rice.
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Wang L,Xu Y,Zhang C,Ma Q,Joo SH,Kim SK,Xu Z,Chong K
PLoS One 2008 3 e3521
OsLIC, a Novel CCCH-Type Zinc Finger Protein with Transcription Activation, Mediates Rice Architecture via Brassinosteroids Signaling.
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Tanabe,S., Ashikari,M., Fujioka,S., Takatsuto,S., Yoshida,S., Yano,M., Yoshimura,A., Kitano,H., Matsuoka,M., Fujisawa,Y., Kato,H. and Iwasaki,Y.
Plant Cell 2005 17(3) 776-790
A Novel Cytochrome P450 Is Implicated in Brassinosteroid Biosynthesis via the Characterization of a Rice Dwarf Mutant, dwarf11, with Reduced Seed Length.
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Hong, Z., M. Ueguchi-Tanaka, K. Umemura, S. Uozu, S. Fujioka, S. Takatsuto, S. Yoshida, M. Ashikari, H. Kitano, and M. Matsuoka
Plant Cell 2003 15 2900-2910
A rice brassinosteroid-deficient mutant, ebisu dwarf (d2), is caused by a loss of function of a new member of cytochrome P450.
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Takamure, I., M.C. Hong and T. Kinoshita
Breeding Science 1996 46(Suppl. 1) 78
Genetic interactions between major genes concerned with grain size in rice.
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Ideta, O., A. Yoshimura and N. Iwata
Breeding Science 1994 44(Suppl. 2) 185
Integration of conventional and RFLP linkage maps in rice.V. The locus of ebisu dwarf (d-2).
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Kinoshita, T.
In Biology of Rice. S. Tsunoda and N. Takahashi eds. JSSP/Elsevier, Tokyo. 1984 187-274.
Gene analysis and linkage map.
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Nagao, S. and M. Takahashi
J. Fac. Agr. Hokkaido Univ. 1963 53(1) 72-130.
Trial construction of twelve linkage groups in Japanese rice. (Genetical studies on rice plant, XXVII).
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Nagao, S.
Adv. Genet. 1951 4 181-212.
Genic analysis and linkage relationship of characters in rice.
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TextPresso Search
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Search textpresso for D2
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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GR:0060185
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オントロジー
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Gene Ontology
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defense response to virus( GO:0051607 )
monooxygenase activity( GO:0004497 )
electron carrier activity( GO:0009055 )
iron ion binding( GO:0005506 )
brassinosteroid mediated signaling( GO:0009742 )
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen( GO:0016705 )
brassinosteroid biosynthetic process( GO:0016132 )
defense response to fungus( GO:0050832 )
regulation of seed germination( GO:0010029 )
response to osmotic stress( GO:0006970 )
response to cold( GO:0009409 )
response to UV-B( GO:0010224 )
response to salt stress( GO:0009651 )
multicellular organismal development( GO:0007275 )
response to brassinosteroid stimulus( GO:0009741 )
response to jasmonic acid stimulus( GO:0009753 )
heme binding( GO:0020037 )
integral to membrane( GO:0016021 )
response to 1-aminocyclopropane-1-carboxylic acid( GO:0009961 )
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Trait Ontology
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basal internode diameter( TO:0000132 )
seed size( TO:0000391 )
brassinosteroid sensitivity( TO:0002677 )
panicle length( TO:0000040 )
sheath blight disease resistance( TO:0000255 )
tiller number( TO:0000346 )
tillering ability( TO:0000329 )
germination rate( TO:0000430 )
salt tolerance( TO:0006001 )
osmotic response sensitivity( TO:0000095 )
leaf angle( TO:0000206 )
cold tolerance( TO:0000303 )
plant height( TO:0000207 )
leaf lamina color( TO:0000299 )
leaf length( TO:0000135 )
jasmonic acid sensitivity( TO:0000172 )
panicle shape( TO:0000262 )
panicle size( TO:0006032 )
tiller angle( TO:0000567 )
grain size( TO:0000397 )
grain number( TO:0002759 )
grain yield( TO:0000396 )
1000-seed weight( TO:0000382 )
UV-B light sensitivity( TO:0000601 )
black streak dwarf virus resistance( TO:0000020 )
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Plant Ontology
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0 seed germination stage( PO:0007057 )
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関連系統
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遺伝子保存系統
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1
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標識遺伝子集積系統
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3
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準同質標識遺伝子系統
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2
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形質画像
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更新日
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2023-09-15 11:51:33.253
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更新情報
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