Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol BPH6
Gene Symbol Synonym Bph6
Gene Name Synonym brown planthopper resistance 6, Brown planthopper resistance-6
Protein Name
Chromosome No. 4
Explanation LOC_Os04g35210. KX818197 (cDNA, indica, cultivar Swarnalata), KX818198 (genomic, indica, cultivar Swarnalata). Gene Expression Omnibus (GEO) under accession code GSE86379. PO:0009006; shoot ; PO:0009025; leaf. GRO:0007049; 03-tillering stage ; GRO:0007047; 02-seedling. Bph6 was finally located in a region bordered by the STS markers Y19 and Y9; the corresponding region is 25-kb on BAC clone OSJNBa0084A10 of Nipponbare. We observed that there were many differences in the deduced amino acid sequences encoded by Bph6 in Swarnalata and Nipponbare (Guo et al. 2018). GO:2000031: regulation of salicylic acid mediated signaling pathway. GO:2000022: regulation of jasmonic acid mediated signaling pathway.
Trait Class Tolerance and resistance - Insect resistance
cDNA Accession No. AK243005
MSU ID LOC_Os04g35210.1
RAP ID Os04g0431700
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link map Classical linkage map
Guo J., Xu C., Wu D., Zhao Y., Qiu Y., Wang X., Ouyang Y., Cai B., Liu X., Jing S., Shangguan X., Wang H., Ma Y., Hu L., Wu Y., Shi S., Wang W., Zhu L., Xu X., Chen R., Feng Y., Du B., He G.
Nat. Genet. 2018  50(2)  297-306
Bph6 encodes an exocyst-localized protein and confers broad resistance to planthoppers in rice.
Fan F., Li N., Chen Y., Liu X., Sun H., Wang J., He G., Zhu Y., Li S.
Front Plant Sci 2017  8  986
Development of Elite BPH-Resistant Wide-Spectrum Restorer Lines for Three and Two Line Hybrid Rice.
Qiu Y., Guo J., Jing S., Zhu L., He G.
Theor. Appl. Genet. 2012  124(3)  485-94
Development and characterization of japonica rice lines carrying the brown planthopper-resistance genes BPH12 and BPH6.
Qiu Y,Guo J,Jing S,Zhu L,He G
Theor. Appl. Genet. 2010  121(8)  1601-11
High-resolution mapping of the brown planthopper resistance gene Bph6 in rice and characterizing its resistance in the 9311 and Nipponbare near isogenic backgrounds.
Kabir, Md. A. and G.S. Khush
Plant Breeding 1988  100(1)  54-58.
Genetic analysis of resistance to brown planthopper in rice (Oryza sativa L).
TextPresso Search Search textpresso for BPH6 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0060094
Gene Ontology response to insect( GO:0009625 )
exocyst( GO:0000145 )
cytokinin mediated signaling( GO:0009736 )
salicylic acid mediated signaling pathway( GO:0009863 )
jasmonic acid mediated signaling pathway( GO:0009867 )
positive regulation of exocytosis( GO:0045921 )
regulation of cytokinin mediated signaling( GO:0080036 )
Trait Ontology brown planthopper resistance( TO:0000424 )
white-backed planthopper resistance( TO:0000205 )
Plant Ontology shoot system( PO:0009006 )
vascular leaf( PO:0009025 )
Related Strains
Phenotype images
Last updated
Aug 14, 2018