Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol KS1
Gene Symbol Synonym OsKS1, KS1, KS1A, KSL1, OsKSL1, OsKS1A, OsKS1B, OsKS1C, Ks1, Os KS1, OsTPS26
CGSNL Gene Name ENT-KAURENE SYNTHASE 1
Gene Name Synonym rice ent-kaurene synthase1, Ent-kaurene synthase 1, "Ent-kaur-16-ene synthase, chloroplastic", Kaurene synthase 1, Ent-kaurene synthase B, ent-kaurene synthase I, terpene synthase 26
Protein Name ENT-KAURENE SYNTHASE 1
Allele osks1-1, osks1-2, osck1-3, osks1, ks1, ks1-1, ks1-2
Chromosome No. 4
Explanation This gene encodes one of the GA metabolic enzymes; ent-kaurene synthase (KS). It is located on chromosome 4 at 104cM linked with OsKS2 and OsKS3. EC=4.2.3.19 Os04g0611800. LOC_Os04g52230. Q0JA82. GRO:0007047; 02-seedling ; GRO:0007139; A-vegetative stage ; GRO:0007040; rice growth stage. AY347876, AY347877, AY347878. EF577651-EF577655 (wild rice species). osks1A mutation is solely responsible for the severe dwarfism (Margis-Pinheiro et al. 2005). GU727062-GU727081 (wild rice species). FJ811084-FJ811124 (Oryza glaberrima, Oryza barthii, Oryza nivara). DQ901919-DQ901953 (wild rice species). EF069714-EF069781 (O. sativa and wild rice species). LOC_Os04g52230.
Trait Class Biochemical character
Vegetative organ - Culm
Expression
Sequence/Locus
cDNA Accession No. AY347877
MSU ID LOC_Os04g52230.1
RAP ID Os04g0611800
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Li J., Zhao Y., Chu H., Wang L., Fu Y., Liu P., Upadhyaya N., Chen C., Mou T., Feng Y., Kumar P., Xu J.
PLoS Genet. 2015  11(8)  e1005464
SHOEBOX Modulates root meristem Size in Rice through Dose-Dependent Effects of Gibberellins on Cell Elongation and Proliferation.
Lee G.W., Lee S., Chung M.S., Jeong Y.S., Chung B.Y.
Protoplasma 2014   
Rice terpene synthase 20 (OsTPS20) plays an important role in producing terpene volatiles in response to abiotic stresses.
Ji S.H., Gururani M.A., Lee J.W., Ahn B.O., Chun S.C.
Plant Biol (Stuttg) 2013   
Isolation and characterisation of a dwarf rice mutant exhibiting defective gibberellins biosynthesis.
Li,Z.M., Zheng,X.M. and Ge,S.
Theor. Appl. Genet. 2011  123(1)  21-31
Genetic diversity and domestication history of African rice (Oryza glaberrima) as inferred from multiple gene sequences
Tang X., Zhang Z.-Y., Zhang W.-J., Zhao X.-M., Li X., Zhang D., Liu Q.-Q., Tang W.-H.
Plant Physiol. 2010  154(4)  1855-1870
Global gene profiling of laser-captured pollen mother cells indicates molecular pathways and gene subfamilies involved in rice meiosis.
Zheng,X.M. and Ge,S.
Mol. Ecol. 2010  19(12)  2439-2454
Ecological divergence in the presence of gene flow in two closely related Oryza species (Oryza rufipogon and O. nivara)
Swaminathan S,Morrone D,Wang Q,Fulton DB,Peters RJ
Plant Cell 2009  21(10)  3315-25
CYP76M7 is an ent-cassadiene C11alpha-hydroxylase defining a second multifunctional diterpenoid biosynthetic gene cluster in rice.
Yang,Y.H., Zhang,F.M. and Ge,S.
BMC Evol. Biol. 2009  9  206
Evolutionary rate patterns of the Gibberellin pathway genes
Yamaguchi S.
Annual Review of Plant Biology 2008  59  225-51
Gibberellin metabolism and its regulation.
Chhun T,Aya K,Asano K,Yamamoto E,Morinaka Y,Watanabe M,Kitano H,Ashikari M,Matsuoka M,Ueguchi-Tanaka M
Plant Cell 2007  19  3876-88
Gibberellin regulates pollen viability and pollen tube growth in rice.
Zhu,Q., Zheng,X., Luo,J., Gaut,B.S. and Ge,S.
Mol. Biol. Evol. 2007  24(3)  875-888
Multilocus analysis of nucleotide variation of Oryza sativa and its wild relatives: severe bottleneck during domestication of rice
Zhang,L.B. and Ge,S.
Mol. Biol. Evol. 2007  24(3)  769-783
Multilocus analysis of nucleotide variation and speciation in Oryza officinalis and its close relatives
Xu,M., Wilderman,P.R., Morrone,D., Xu,J., Roy,A., Margis-Pinheiro,M., Upadhyaya,N.M., Coates,R.M. and Peters,R.J.
Phytochemistry 2007  68(3)  312-326
Functional characterization of the rice kaurene synthase-like gene family
He, Chaozu
Molecular Genetics & Genomics (Molecular General Genetics up to 2001) 2007  278  85-94
The rice OsLOL2 gene encodes a zinc finger protein involved in rice growth and disease resistance.
Kanno,Y., Otomo,K., Kenmoku,H., Mitsuhashi,W., Yamane,H., Oikawa,H., Toshima,H., Matsuoka,M., Sassa,T. and Toyomasu,T.
Biosci. Biotechnol. Biochem. 2006  70(7)  1702-1710
Characterization of a rice gene family encoding type-a diterpene cyclases.
Peters,R.J.
Phytochemistry 2006  67(21)  2307-2317
Uncovering the complex metabolic network underlying diterpenoid phytoalexin biosynthesis in rice and other cereal crop plants.
Margis-Pinheiro,M., Zhou,X.R., Zhu,Q.H., Dennis,E.S. and Upadhyaya,N.M.
Plant Cell Rep. 2005  23(12)  819-833
Isolation and characterization of a Ds-tagged rice (Oryza sativa L.) GA-responsive dwarf mutant defective in an early step of the gibberellin biosynthesis pathway.
Sakamoto, T., K. Miura, H. Itoh, T. Tatsumi, M. Ueguchi-Tanaka, K. Ishiyama, M. Kobayashi, G.K. Agrawal, S. Takeda, K. Abe, A. Miyao, H. Hirochika, H. Kitano, M. Ashikari and M. Matsuoka
Plant Physiol. 2004  134  1642-1653
An overview of gibberellin metabolism enzyme genes and their related mutants in rice.
TextPresso Search Search textpresso for KS1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0020067
Ontologies
Gene Ontology magnesium ion binding( GO:0000287 )
mitochondrion( GO:0005739 )
metabolic process( GO:0008152 )
chloroplast( GO:0009507 )
plastid( GO:0009536 )
ent-kaurene synthase activity( GO:0009899 )
gibberellin metabolic process( GO:0009685 )
gibberellin biosynthetic process( GO:0009686 )
Trait Ontology enzyme activity( TO:0000599 )
growth and development trait( TO:0000357 )
gibberellic acid content( TO:0002675 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Nov 30, 2015


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