Gene - Detail

Detail of Gene

Click here for feedback

Basic Information
CGSNL Gene Symbol CPS2
Gene Symbol Synonym OsCPS2, cps2, OsCPS2ent, CYC2, OsCyc2, OsCYC2, OsCPSL1, cpsl1, OsCyc2/OsCPS2, OsTPS7, Os-CPS2, TPS13, OsTPS13
CGSNL Gene Name ENT-COPALYL DIPHOSPHATE SYNTHASE 2
Gene Name Synonym rice ent-copalyl diphosphate (CDP) synthase2, ent-copalyl diphosphate synthase 2, Ent-CDP synthase 2, ent-copalyl diphosphate synthase like 1, cyclase2, cyclase 2, ent-CDP synthase, terpene synthase 7
Protein Name ENT-COPALYL DIPHOSPHATE SYNTHASE 2
Allele
Chromosome No. 2
Explanation Q6Z5I0(japonica). Q5MQ85(indica). AY602991. AB066271. This gene encodes one of the GA metabolic enzymes; ent-copalyl diphosphate synthase (CPS). This gene is located on chromosome 2 at 86cM. EC=5.5.1.13 Ent-kaurene synthase A. GRO:0007139; A-vegetative stage ; GRO:0007040; rice growth stage. This gene encodes ent-CDP (copalyl diphospate) synthase, which is responsible for the biosynthesis of oryzalexins A-F and phytocassanes A-E. TPS13 in Sun et al. 2022.
Trait Class Biochemical character
Tolerance and resistance - Disease resistance
Tolerance and resistance - Insect resistance
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK072928
MSU ID LOC_Os02g36210.1
RAP ID Os02g0571100
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Jiang W., Ye Q., Wu Z., Zhang Q., Wang L., Liu J., Hu X., Guo D., Wang X., Zhang Z., He H., Hu L.
Genes (Basel) 2023  14(1) 
Analysis of CAT Gene Family and Functional Identification of OsCAT3 in Rice.
Liu C., Zhu X., Zhang J., Shen M., Chen K., Fu X., Ma L., Liu X., Zhou C., Zhou D.X., Wang G.
Plant Biotechnol. J. 2022  20(12)  2357-2371
eQTLs play critical roles in regulating gene expression and identifying key regulators in rice.
Ninkuu V., Yan J., Zhang L., Fu Z., Yang T., Li S., Li B., Duan J., Ren J., Li G., Yang X., Zeng H.
Front Plant Sci 2022  13  980821
Hrip1 mediates rice cell wall fortification and phytoalexins elicitation to confer immunity against <i>Magnaporthe oryzae</i>.
Sun Y., Zhang P.T., Kou D.R., Han Y.C., Fang J.C., Ni J.P., Jiang B., Wang X., Zhang Y.J., Wang W., Kong X.D.
Front Plant Sci 2022  13  905982
Terpene Synthases in Rice Pan-Genome and Their Responses to <i>Chilo suppressalis</i> Larvae Infesting.
Dash M., Somvanshi V.S., Budhwar R., Godwin J., Shukla R.N., Rao U.
Planta 2021  253(5)  108
A rice root-knot nematode Meloidogyne graminicola-resistant mutant rice line shows early expression of plant-defence genes.
Wang Y., Du F., Wang J., Li Y., Zhang Y., Zhao X., Zheng T., Li Z., Xu J., Wang W., Fu B.
Int J Mol Sci 2021  22(17) 
Molecular Dissection of the Gene <i>OsGA2ox8</i> Conferring Osmotic Stress Tolerance in Rice.
Murphy K.M., Zerbe P.
Phytochemistry 2020  172  112289
Specialized diterpenoid metabolism in monocot crops: Biosynthesis and chemical diversity.
Sánchez-Sanuy F., Peris-Peris C., Tomiyama S., Okada K., Hsing Y.I., San Segundo B., Campo S.
BMC Plant Biol. 2019  19(1)  563
Osa-miR7695 enhances transcriptional priming in defense responses against the rice blast fungus.
Salvador-Guirao R., Baldrich P., Tomiyama S., Hsing Y.I., Okada K., San Segundo B.
Ann. Bot. 2019  123(1)  79-93
OsDCL1a activation impairs phytoalexin biosynthesis and compromises disease resistance in rice.
Lu X., Zhang J., Brown B., Li R., Rodríguez-Romero J., Berasategui A., Liu B., Xu M., Luo D., Pan Z., Baerson S.R., Gershenzon J., Li Z., Sesma A., Yang B., Peters R.J.
Plant Cell 2018  30(5)  1119-1131
Inferring Roles in Defense from Metabolic Allocation of Rice Diterpenoids.
Burman N., Bhatnagar A., Khurana J.P.
Plant Physiol. 2017   
OsbZIP48, a HY5 transcription factor ortholog, exerts pleiotropic effects in light-regulated development.
Liu J., Chen X., Liang X., Zhou X., Yang F., Liu J., He S.Y., Guo Z.
Plant Physiol. 2016   
Alternative splicing of rice WRKY62 and WRKY76 transcription factor genes in pathogen defense.
Fukushima S., Mori M., Sugano S., Takatsuji H.
Plant Cell Physiol. 2016  57(12)  2541-2551
Transcription Factor WRKY62 Plays a Role in Pathogen Defense and Hypoxia-Responsive Gene Expression in Rice.
Toyomasu T., Usui M., Sugawara C., Kanno Y., Sakai A., Takahashi H., Nakazono M., Kuroda M., Miyamoto K., Morimoto Y., Mitsuhashi W., Okada K., Yamaguchi S., Yamane H.
J. Exp. Bot. 2014   
Transcripts of two ent-copalyl diphosphate synthase genes differentially localize in rice plants according to their distinct biological roles.
Lee G.W., Lee S., Chung M.S., Jeong Y.S., Chung B.Y.
Protoplasma 2014   
Rice terpene synthase 20 (OsTPS20) plays an important role in producing terpene volatiles in response to abiotic stresses.
Park H.L., Lee S.W., Jung K.H., Hahn T.R., Cho M.H.
Phytochemistry 2013  96  57-71
Transcriptomic analysis of UV-treated rice leaves reveals UV-induced phytoalexin biosynthetic pathways and their regulatory networks in rice.
Kurusu T,Hamada J,Nokajima H,Kitagawa Y,Kiyoduka M,Takahashi A,Hanamata S,Ohno R,Hayashi T,Okada K,Koga J,Hirochika H,Yamane H,Kuchitsu K
Plant Physiol. 2010  153  678-92
Regulation of microbe-associated molecular pattern-induced hypersensitive cell death, phytoalexin production, and defense gene expression by calcineurin B-like protein-interacting protein kinases, OsCIPK14/15, in rice cultured cells.
Swaminathan S,Morrone D,Wang Q,Fulton DB,Peters RJ
Plant Cell 2009  21(10)  3315-25
CYP76M7 is an ent-cassadiene C11alpha-hydroxylase defining a second multifunctional diterpenoid biosynthetic gene cluster in rice.
Shimizu T,Jikumaru Y,Okada A,Okada K,Koga J,Umemura K,Minami E,Shibuya N,Hasegawa M,Kodama O,Nojiri H,Yamane H
Phytochemistry 2008  69  973-81
Effects of a bile acid elicitor, cholic acid, on the biosynthesis of diterpenoid phytoalexins in suspension-cultured rice cells.
Okada,A., Shimizu,T., Okada,K., Kuzuyama,T., Koga,J., Shibuya,N., Nojiri,H. and Yamane,H.
Plant Mol. Biol. 2007  65(1-2)  177-187
Elicitor induced activation of the methylerythritol phosphate pathway toward phytoalexins biosynthesis in rice
Tanaka N,Matsuoka M,Kitano H,Asano T,Kaku H,Komatsu S
Plant Cell Environ. 2006  29  619-31
gid1, a gibberellin-insensitive dwarf mutant, shows altered regulation of probenazole-inducible protein (PBZ1) in response to cold stress and pathogen attack.
Kanno,Y., Otomo,K., Kenmoku,H., Mitsuhashi,W., Yamane,H., Oikawa,H., Toshima,H., Matsuoka,M., Sassa,T. and Toyomasu,T.
Biosci. Biotechnol. Biochem. 2006  70(7)  1702-1710
Characterization of a rice gene family encoding type-a diterpene cyclases.
Nemoto,T., Cho,E.M., Okada,A., Okada,K., Otomo,K., Kanno,Y., Toyomasu,T., Mitsuhashi,W., Sassa,T., Minami,E., Shibuya,N., Nishiyama,M., Nojiri,H. and Yamane,H.
FEBS Lett. 2004  571(1-3)  182-186
Stemar-13-ene synthase, a diterpene cyclase involved in the biosynthesis of the phytoalexin oryzalexin S in rice.
Prisic,S., Xu,M., Wilderman,P.R. and Peters,R.J.
Plant Physiol. 2004  136(4)  4228-4236
Rice Contains Two Disparate ent-Copalyl Diphosphate Synthases with Distinct Metabolic Functions.
Otomo,K., Kenmoku,H., Oikawa,H., Konig,W.A., Toshima,H., Mitsuhashi,W., Yamane,H., Sassa,T. and Toyomasu,T.
Plant J. 2004  39(6)  886-893
Biological functions of ent- and syn-copalyl diphosphate synthases in rice: key enzymes for the branch point of gibberellin and phytoalexin biosynthesis.
Sakamoto, T., K. Miura, H. Itoh, T. Tatsumi, M. Ueguchi-Tanaka, K. Ishiyama, M. Kobayashi, G.K. Agrawal, S. Takeda, K. Abe, A. Miyao, H. Hirochika, H. Kitano, M. Ashikari and M. Matsuoka
Plant Physiol. 2004  134  1642-1653
An overview of gibberellin metabolism enzyme genes and their related mutants in rice.
TextPresso Search Search textpresso for CPS2 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0020065
Ontologies
Gene Ontology defense response to nematode( GO:0002215 )
response to molecule of fungal origin( GO:0002238 )
defense response to insect( GO:0002213 )
magnesium ion binding( GO:0000287 )
mitochondrion( GO:0005739 )
defense response( GO:0006952 )
ent-copalyl diphosphate synthase activity( GO:0009905 )
lyase activity( GO:0016829 )
metabolic process( GO:0008152 )
plastid( GO:0009536 )
gibberellin metabolic process( GO:0009685 )
response to UV( GO:0009411 )
phytoalexin biosynthetic process( GO:0052315 )
cyclase activity( GO:0009975 )
diterpene phytoalexin precursor biosynthetic process pathway( GO:0051504 )
defense response to bacterium( GO:0042742 )
defense response to fungus( GO:0050832 )
response to iron ion( GO:0010039 )
Trait Ontology UV light sensitivity( TO:0000160 )
growth and development trait( TO:0000357 )
enzyme activity( TO:0000599 )
bacterial blight disease resistance( TO:0000175 )
blast disease( TO:0000074 )
iron sensitivity( TO:0000224 )
stem borer resistance( TO:0000454 )
insect damage resistance( TO:0000261 )
nematode damage resistance( TO:0000384 )
Plant Ontology -
Related Strains
-
Phenotype images
-
Last updated
Jul 5, 2023


/rice/oryzabase