Gene - Detail

Detail of Gene

Click here for feedback

Basic Information
CGSNL Gene Symbol CPS1
Gene Symbol Synonym OsCPS1, OsCPS1ent, OsCPS, Os CPS1, OsTPS4, TPS4, TPS29, OsTPS29
CGSNL Gene Name ENT-COPALYL DIPHOSPHATE SYNTHASE 1
Gene Name Synonym rice ent-copalyl diphosphate (CDP) synthase1, ent-copalyl diphosphate synthase 1, "Ent-copalyl diphosphate synthase 1, chloroplastic", Ent-CDP synthase 1, terpene synthase 4
Protein Name ENT-COPALYL DIPHOSPHATE SYNTHASE 1
Allele oscps1-1, oscps1-2, cps1, Os cps1-1, cps1-1, cps1-2
Chromosome No. 2
Explanation This gene encodes one of the GA metabolic enzymes; ent-copalyl diphosphate synthase (CPS). This gene is located on chromosome 2 at 2.49cM. EC=5.5.1.13 Ent-kaurene synthase A. AB126932. Q6ET36(japonica). GRO:0007047; 02-seedling ; GRO:0007139; A-vegetative stage ; GRO:0007040; rice growth stage. EF577637-EF577641 (wild rice species). DQ901860-DQ901889 (wild rice species). TPS29 in Sun et al. 2022.
Trait Class Biochemical character
Vegetative organ - Culm
Expression
Sequence/Locus
cDNA Accession No. AK100333
MSU ID LOC_Os02g17780.1
RAP ID Os02g0278700
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Sun Y., Zhang P.T., Kou D.R., Han Y.C., Fang J.C., Ni J.P., Jiang B., Wang X., Zhang Y.J., Wang W., Kong X.D.
Front Plant Sci 2022  13  905982
Terpene Synthases in Rice Pan-Genome and Their Responses to <i>Chilo suppressalis</i> Larvae Infesting.
Jang S., Cho J.Y., Do G.R., Kang Y., Li H.Y., Song J., Kim H.Y., Kim B.G., Hsing Y.I.
Int J Mol Sci 2021  22(15) 
Modulation of Rice leaf angle and grain size.by Expressing <i>OsBCL1</i> and <i>OsBCL2</i> under the Control of <i>OsBUL1</i> Promoter.
Murphy K.M., Zerbe P.
Phytochemistry 2020  172  112289
Specialized diterpenoid metabolism in monocot crops: Biosynthesis and chemical diversity.
Tang Y., Liu H., Guo S., Wang B., Li Z., Chong K., Xu Y.
Plant Physiol. 2018  176(1)  946-959
OsmiR396d Affects Gibberellin and Brassinosteroid Signaling to Regulate Plant Architecture in Rice.
Bollinedi H., S GK., Prabhu K.V., Singh N.K., Mishra S., Khurana J.P., Singh A.K.
PLoS ONE 2017  12(1)  e0169600
Molecular and Functional Characterization of GR2-R1 Event Based Backcross Derived Lines of Golden Rice in the Genetic Background of a Mega Rice Variety Swarna.
Li C., Liu Y., Shen W.H., Yu Y., Dong A.
J Integr Plant Biol 2017   
Chromatin-remodeling factor OsINO80 is involved in regulation of gibberellin biosynthesis and is crucial for rice plant growth and development.
Toyomasu T., Usui M., Sugawara C., Kanno Y., Sakai A., Takahashi H., Nakazono M., Kuroda M., Miyamoto K., Morimoto Y., Mitsuhashi W., Okada K., Yamaguchi S., Yamane H.
J. Exp. Bot. 2014   
Transcripts of two ent-copalyl diphosphate synthase genes differentially localize in rice plants according to their distinct biological roles.
Lee G.W., Lee S., Chung M.S., Jeong Y.S., Chung B.Y.
Protoplasma 2014   
Rice terpene synthase 20 (OsTPS20) plays an important role in producing terpene volatiles in response to abiotic stresses.
Zhang C.C., Yuan W.Y., Zhang Q.F.
Mol Plant 2012  5(2)  482-93
RPL1, a Gene Involved in Epigenetic Processes Regulates Phenotypic Plasticity in Rice.
Tang X., Zhang Z.-Y., Zhang W.-J., Zhao X.-M., Li X., Zhang D., Liu Q.-Q., Tang W.-H.
Plant Physiol. 2010  154(4)  1855-1870
Global gene profiling of laser-captured pollen mother cells indicates molecular pathways and gene subfamilies involved in rice meiosis.
Yang,Y.H., Zhang,F.M. and Ge,S.
BMC Evol. Biol. 2009  9  206
Evolutionary rate patterns of the Gibberellin pathway genes
Yamaguchi S.
Annual Review of Plant Biology 2008  59  225-51
Gibberellin metabolism and its regulation.
Zhang,L.B. and Ge,S.
Mol. Biol. Evol. 2007  24(3)  769-783
Multilocus analysis of nucleotide variation and speciation in Oryza officinalis and its close relatives
Chhun T,Aya K,Asano K,Yamamoto E,Morinaka Y,Watanabe M,Kitano H,Ashikari M,Matsuoka M,Ueguchi-Tanaka M
Plant Cell 2007  19  3876-88
Gibberellin regulates pollen viability and pollen tube growth in rice.
Kanno,Y., Otomo,K., Kenmoku,H., Mitsuhashi,W., Yamane,H., Oikawa,H., Toshima,H., Matsuoka,M., Sassa,T. and Toyomasu,T.
Biosci. Biotechnol. Biochem. 2006  70(7)  1702-1710
Characterization of a rice gene family encoding type-a diterpene cyclases.
Tanaka N,Matsuoka M,Kitano H,Asano T,Kaku H,Komatsu S
Plant Cell Environ. 2006  29  619-31
gid1, a gibberellin-insensitive dwarf mutant, shows altered regulation of probenazole-inducible protein (PBZ1) in response to cold stress and pathogen attack.
Otomo,K., Kenmoku,H., Oikawa,H., Konig,W.A., Toshima,H., Mitsuhashi,W., Yamane,H., Sassa,T. and Toyomasu,T.
Plant J. 2004  39(6)  886-893
Biological functions of ent- and syn-copalyl diphosphate synthases in rice: key enzymes for the branch point of gibberellin and phytoalexin biosynthesis.
Sakamoto, T., K. Miura, H. Itoh, T. Tatsumi, M. Ueguchi-Tanaka, K. Ishiyama, M. Kobayashi, G.K. Agrawal, S. Takeda, K. Abe, A. Miyao, H. Hirochika, H. Kitano, M. Ashikari and M. Matsuoka
Plant Physiol. 2004  134  1642-1653
An overview of gibberellin metabolism enzyme genes and their related mutants in rice.
Prisic,S., Xu,M., Wilderman,P.R. and Peters,R.J.
Plant Physiol. 2004  136(4)  4228-4236
Rice Contains Two Disparate ent-Copalyl Diphosphate Synthases with Distinct Metabolic Functions.
TextPresso Search Search textpresso for CPS1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0020064
Ontologies
Gene Ontology metabolic process( GO:0008152 )
chloroplast( GO:0009507 )
plastid( GO:0009536 )
gibberellin metabolic process( GO:0009685 )
diterpene phytoalexin precursor biosynthetic process pathway( GO:0051504 )
magnesium ion binding( GO:0000287 )
ent-copalyl diphosphate synthase activity( GO:0009905 )
lyase activity( GO:0016829 )
gibberellin biosynthetic process( GO:0009686 )
Trait Ontology enzyme activity( TO:0000599 )
growth and development trait( TO:0000357 )
plant height( TO:0000207 )
Plant Ontology -
Related Strains
-
Phenotype images
-
Last updated
Sep 20, 2022


/rice/oryzabase