Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol HAP3C
Gene Symbol Synonym OsHAP3C, OsNF-YB-4, NFYB4, OsNF-YB3, NF-YB3, NFYB3, OsHAP3B, HAP3B
CGSNL Gene Name HAP3C SUBUNIT OF CCAAT-BOX BINDING COMPLEX
Gene Name Synonym rice HAP3C, Nuclear transcription factor Y subunit B-4, Transcriptional activator HAP3C, NUCLEAR FACTOR-Y subunit B3, NUCLEAR FACTOR-Y subunit NF-YB3, NF-YB subunit 3, NF-YB family 3
Protein Name HAP3C SUBUNIT OF CCAAT-BOX BINDING COMPLEX
Allele
Chromosome No. 5
Explanation This gene regulates chloroplast biogenesis. AB095440. NF-YB, CBF-A. Q65XK1. LOC_Os05g38820. NF-YB3 (HAP3B) in Petroni et al. 2012 and Yang et al. 2017. OsHAP3B in Li et al. 2016.
Trait Class Vegetative organ - Leaf
Other
Expression
Sequence/Locus
cDNA Accession No. AK100811
MSU ID LOC_Os05g38820.4
RAP ID Os05g0463800
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Yanga W., Lub Z., Xionga Y., Yaoa J.
The Crop Journal 2017  5(1)  21-31
Genome-wide identification and co-expression network analysis of the OsNF-Y gene family in rice
Li Q., Yan W., Chen H., Tan C., Han Z., Yao W., Li G., Yuan M., Xing Y.
J. Exp. Bot. 2016  67(6)  1759-68
Duplication of OsHAP family genes and their association with heading date in rice.
Petroni K., Roderick W Kumimoto, Gnesutta N., Calvenzani V., Fornari M., Tonelli C., Ben F Holt, Mantovani R.
Plant Cell 2012  24(12)  4777-92
The promiscuous life of plant NUCLEAR FACTOR Y transcription factors.
Thirumurugan,T., Ito,Y., Kubo,T., Serizawa,A. and Kurata,N.
Mol. Genet. Genomics 2008  279(3)  279-289
Identification, characterization and interaction of HAP family genes in rice
Miyoshi,K., Ito,Y., Serizawa,A. and Kurata,N.
Plant J. 2003  36(4)  532-540
OsHAP3 genes regulate chloroplast biogenesis in rice.
TextPresso Search Search textpresso for HAP3C ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology nucleus( GO:0005634 )
transcription( GO:0006350 )
regulation of transcription, DNA-dependent( GO:0006355 )
sequence-specific DNA binding( GO:0043565 )
Trait Ontology -
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Dec 13, 2017


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