|
Basic Information
|
|
CGSNL Gene Symbol
|
HAP3A
|
|
Gene Symbol Synonym
|
OsHAP3A,OsNF-YB-2, NFYB2, NF-YB2
|
|
CGSNL Gene Name
|
HAP3A SUBUNIT OF CCAAT-BOX BINDING COMPLEX
|
|
Gene Name Synonym
|
rice HAP3A, Nuclear transcription factor Y subunit B-2, NUCLEAR FACTOR-Y subunit B2, NUCLEAR FACTOR-Y subunit NF-YB2, Transcriptional activator HAP3A, NF-YB subunit 2, NF-YB family 2
|
|
Protein Name
|
HAP3A SUBUNIT OF CCAAT-BOX BINDING COMPLEX
|
|
Allele
|
|
|
Chromosome No.
|
1
|
|
Explanation
|
This gene regulates chloroplast biogenesis. AB095438, AK108142. NF-YB, CBF-A. Q5QMG3.
|
|
Trait Class
|
Vegetative organ - Leaf
Other
|
|
Expression
|
|
|
Sequence/Locus
|
|
cDNA Accession No.
|
AK108142
|
|
MSU ID
|
LOC_Os01g61810.1
LOC_Os01g61810.2
|
|
RAP ID
|
Os01g0834400
|
|
Links
|
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
|
INSD Accession List
(Test version)
|
Link to INSD Accession List
|
|
Map
|
|
Locate(cM)
|
|
|
Link map
|
Classical linkage map
|
|
References
|
|
Xu T., Zhang J., Liu Y., Zhang Q., Li W., Zhang Y., Wu M., Chen T., Ding D., Wang W., Zhang Z.
Front Plant Sci 2022 13 986678
Exon skipping in <i>IspE</i> Gene is associated with abnormal chloroplast development in rice <i>albino leaf 4</i> mutant.
|
|
Yanga W., Lub Z., Xionga Y., Yaoa J.
The Crop Journal 2017 5(1) 21-31
Genome-wide identification and co-expression network analysis of the OsNF-Y gene family in rice
|
|
Li Q., Yan W., Chen H., Tan C., Han Z., Yao W., Li G., Yuan M., Xing Y.
J. Exp. Bot. 2016 67(6) 1759-68
Duplication of OsHAP family genes and their association with heading date in rice.
|
|
Petroni K., Roderick W Kumimoto, Gnesutta N., Calvenzani V., Fornari M., Tonelli C., Ben F Holt, Mantovani R.
Plant Cell 2012 24(12) 4777-92
The promiscuous life of plant NUCLEAR FACTOR Y transcription factors.
|
|
Thirumurugan,T., Ito,Y., Kubo,T., Serizawa,A. and Kurata,N.
Mol. Genet. Genomics 2008 279(3) 279-289
Identification, characterization and interaction of HAP family genes in rice
|
|
Miyoshi,K., Ito,Y., Serizawa,A. and Kurata,N.
Plant J. 2003 36(4) 532-540
OsHAP3 genes regulate chloroplast biogenesis in rice.
|
|
DB Reference
|
|
Gramene ID
|
-
|
|
Ontologies
|
|
Gene Ontology
|
nucleus( GO:0005634 )
transcription( GO:0006350 )
regulation of transcription, DNA-dependent( GO:0006355 )
sequence-specific DNA binding( GO:0043565 )
chloroplast organization( GO:0009658 )
|
|
Trait Ontology
|
chloroplast development trait( TO:0002715 )
|
|
Plant Ontology
|
-
|
|
Related Strains
|
|
-
|
|
Phenotype images
|
|
-
|
|
Last updated
|
|
Jun 28, 2023
|
Update info.