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Basic Information
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CGSNL Gene Symbol
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NAS3
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Gene Symbol Synonym
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OsNAS3
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CGSNL Gene Name
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NICOTIANAMINE SYNTHASE 3
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Gene Name Synonym
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rice nicotianamine synthase3, NA synthase gene 3, Nicotianamine synthase 3, S-adenosyl-L-methionine:S-adenosyl-L-methionine:S-adenosyl-methionine 3-amino-3-carboxypropyltransferase 3
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Protein Name
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NICOTIANAMINE SYNTHASE 3
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Allele
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osnas3-1
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Chromosome No.
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7
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Explanation
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Nicotianamine synthase is a critical component in Fe acquisition in graminaceous plants. Nicotianamine and nicotianamine synthase play an important role in long-distance trasport of Fe in rice plants. EC=2.5.1.43. A2YQ58(indcica). Q0D3F2(japonica). TO:0006049: iron concentration. TO:0006053: zinc concentration. TO:0006052: copper concentration. GO:0120127: response to zinc ion starvation . GO:1990641: response to iron ion starvation. Candidate gene for qCo7.1 and qZn7.2 (QTL for Zn and Co concentrations). PO:0030123: panicle inflorescence.
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Trait Class
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Biochemical character
Tolerance and resistance - Stress tolerance
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK070656
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MSU ID
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LOC_Os07g48980.1
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RAP ID
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Os07g0689600
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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Link to INSD Accession List
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Regon P., Dey S., Rehman M., Pradhan A.K., Chowra U., Tanti B., Talukdar A.D., Panda S.K.
Front Plant Sci 2022 13 798580
Transcriptomic Analysis Revealed Reactive Oxygen Species Scavenging Mechanisms Associated With Ferrous Iron Toxicity in Aromatic Keteki Joha Rice.
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Liu C., Li N., Lu Z., Sun Q., Pang X., Xiang X., Deng C., Xiong Z., Shu K., Yang F., Hu Z.
Front Plant Sci 2022 13 839457
CG and CHG Methylation Contribute to the Transcriptional Control of OsPRR37-output Genes in Rice.
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Cu S.T., Warnock N.I., Pasuquin J., Dingkuhn M., Stangoulis J.
Sci Rep 2021 11(1) 19230
A high-resolution genome-wide association study of the grain ionome and agronomic traits in rice Oryza sativa subsp. indica.
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Wang S., Li L., Ying Y., Wang J., Shao J.F., Yamaji N., Whelan J., Ma J.F., Shou H.
New Phytol. 2020 225(3) 1247-1260
A transcription factor OsbHLH156 regulates Strategy II iron acquisition through localising IRO2 to the nucleus in rice.
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Abbai R., Singh V.K., Nachimuthu V.V., Sinha P., Selvaraj R., Vipparla A.K., Singh A.K., Singh U.M., Varshney R.K., Kumar A.
Plant Biotechnol. J. 2019
Haplotype analysis of key genes governing grain yield and quality traits across 3K RG panel reveals scope for the development of tailor-made rice with enhanced genetic gains.
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Bashir K., Ishimaru Y., Itai R.N., Senoura T., Takahashi M., An G., Oikawa T., Ueda M., Sato A., Uozumi N., Nakanishi H., Nishizawa N.K.
Plant Mol. Biol. 2015 88(1-2) 165-76
Iron deficiency regulated OsOPT7 is essential for iron homeostasis in rice.
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Agarwal S., Tripura Venkata VG., Kotla A., Mangrauthia S.K., Neelamraju S.
Gene 2014 546(2) 430-6
Expression patterns of QTL based and other candidate genes in Madhukar × Swarna RILs with contrasting levels of iron and zinc in unpolished rice grains.
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Wang L., Ying Y., Narsai R., Ye L., Zheng L., Tian J., Whelan J., Shou H.
Plant Cell Environ. 2012 36(1) 224-36.
Identification of OsbHLH133 as a regulator of iron distribution between roots and shoots in Oryza sativa.
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Anuradha K., Agarwal S., Rao Y.V., Rao K.V., Viraktamath B.C., Sarla N.
Gene 2012 508(2) 233-40
Mapping QTLs and candidate genes for iron and zinc concentrations in unpolished rice of Madhukar×Swarna RILs.
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Suzuki M., Bashir K., Inoue H., Takahashi M., Nakanishi H., Nishizawa N.K.
Rice (N Y) 2012 5 9
Accumulation of starch in Zn-deficient rice
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Johnson A.A., Kyriacou B., Callahan D.L., Carruthers L., Stangoulis J., Lombi E., Tester M.
PLoS ONE 2011 6(9) e24476
Constitutive overexpression of the OsNAS gene family reveals single-gene strategies for effective iron- and zinc-biofortification of rice endosperm.
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Lee S., Un Sil Jeon, Seung Jin Lee, Yoon-Keun Kim, Daniel Pergament Persson, Søren Husted, Jan K Schjørring, Kakei Y., Masuda H., Naoko K Nishizawa, An G.
Proc. Natl. Acad. Sci. U.S.A. 2009 106(51) 22014-9
Iron fortification of rice seeds through activation of the nicotianamine synthase gene.
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Kobayashi T,Itai RN,Ogo Y,Kakei Y,Nakanishi H,Takahashi M,Nishizawa NK
Plant J. 2009 60(6) 948-61
The rice transcription factor IDEF1 is essential for the early response to iron deficiency, and induces vegetative expression of late embryogenesis abundant genes.
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Ogo,Y., Itai,R.N., Nakanishi,H., Inoue,H., Kobayashi,T., Suzuki,M., Takahashi,M., Mori,S. and Nishizawa,N.K.
J. Exp. Bot. 2006 57(11) 2867-2878
Isolation and characterization of IRO2, a novel iron-regulated bHLH transcription factor in graminaceous plants
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Nozoye T., Reiko Nakanishi Ita, Nagasaki S., Takahashi M., Nakanishi H., Mori S., Naoko K Nishikawa
Soil Sci Plant Nutr 2004 50(7) 1125-1131
Diurnal Changes in the Expression of Genes That Participate in Phytosiderophore Synthesis in Rice
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Inoue, H., K. Higuchi, M. Takahashi, H. Nakanishi, S. Mori and N.K. Nishizawa
Plant J. 2003 36 (3) 366-381
Three rice nicotianamine synthase genes, OsNAS1, OsNAS2, and OsNAS3 are expressed in cells involved in long-distance transport of iron and differentially regulated by iron.
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Higuchi K, Suzuki K, Nakanishi H, Yamaguchi H, Nishizawa NK, Mori S.
Plant Physiol. 1999 119(2) 471-480
Cloning of nicotianamine synthase genes, novel genes involved in the biosynthesis of phytosiderophores.
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TextPresso Search
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Search textpresso for NAS3
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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GR:0080049
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Ontologies
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Gene Ontology
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response to iron(II) ion( GO:0010040 )
circadian rhythm( GO:0007623 )
iron ion transport( GO:0006826 )
nicotianamine synthase activity( GO:0030410 )
nicotianamine biosynthetic process( GO:0030418 )
response to nickel ion( GO:0010045 )
response to copper ion( GO:0046688 )
response to iron ion( GO:0010039 )
response to zinc ion( GO:0010043 )
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Trait Ontology
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iron sensitivity( TO:0000224 )
copper sensitivity( TO:0000021 )
zinc sensitivity( TO:0000351 )
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Plant Ontology
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companion cell( PO:0000071 )
guard cell( PO:0000293 )
pericycle( PO:0006203 )
root( PO:0009005 )
vascular leaf( PO:0009025 )
seed( PO:0009010 )
0 seed germination stage( PO:0007057 )
radicle( PO:0020031 )
plumule( PO:0020032 )
leaf( PO:0025034 )
shoot system( PO:0009006 )
leaf sheath( PO:0020104 )
stem( PO:0009047 )
inflorescence( PO:0009049 )
spikelet( PO:0009051 )
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Related Strains
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Phenotype images
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Last updated
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Jun 22, 2022
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