遺伝子 - 詳細

詳細 - 遺伝子

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Basic Information
CGSNL 遺伝子シンボル HBD2
遺伝子シンボルシノニム OsCKI1, CKI, hbd2, CKI1, LTG1, OsCKI1/LTRPK1, LTRPK1, OsLTRPK1, LSES1, OsLSES1
CGSNL 遺伝子名 HYBRID BREAKDOWN 2
遺伝子名シノニム hybrid breakdown 2, rice casein Kinase I, casein kinase I, casein kinase I1, Low Temperature Growth 1, low-temperature response protein kinase 1, leaf starch excess and senescence 1
タンパク質名 CASEIN KINASE I
対立遺伝子 OsCKI1-1, OsCKI1-2, ltg1, lses1, osckI1
染色体番号 2
解説 ホモ型では側根数および不定根数が減少するなどの根の発育異常が現われ、また細胞伸長の減少により一次根長が短かくなる。AJ487966. PO:0009005; root ; PO:0020125; elongation zone. GRO:0007047; 02-seedling ; GRO:0007043; 01-germination ; GRO:0007059; 2.01-first leaf through coleoptile. The gene on chromosome 2, designated hybrid breakdown 2 (hbd2), was mapped between simple sequence repeat markers RM3515 and RM3730. GO:0060918: auxin transport. NCBI SRA database with accession number PRJNA757395. ProteomeX- change database with accession number PXD030669.
形質クラス 生化学的性質
栄養器官 - 葉
栄養器官 - 根
生殖器官 - 受粉、受精、稔性 - 雑種弱勢
耐性、抵抗性 - ストレス耐性
発現
Sequence/Locus
cDNA Accession No. AK101388
MSU ID LOC_Os02g40860.1
RAP ID Os02g0622100
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		Link to INSD Accession List
マップ
位置情報(cM)
リンケージマップ Classical linkage map
文献
Chen Z., Wang Y., Huang R., Zhang Z., Huang J., Yu F., Lin Y., Guo Y., Liang K., Zhou Y., Chen F.
BMC Plant Biol. 2022  22(1)  137
Integration of transcriptomic and proteomic analyses reveals several levels of metabolic regulation in the excess starch and early senescent leaf mutant LSES1 in rice.
Lu G., Wu F.Q., Wu W., Wang H.J., Zheng X.M., Zhang Y., Chen X., Zhou K., Jin M., Cheng Z., Li X., Jiang L., Wang H., Wan J.
Plant J. 2014  78(3)  468-80
Rice ltg1 is involved in adaptive growth and fitness under low ambient temperature.
Liu W.a, Ji S.b, Fang X.a c, Wang Q.a, Li Z.a, Yao F.a, Hou L.a, Dai S.b
J. Plant Growth Regul. 2013  32  483-490
Protein Kinase LTRPK1 Influences Cold Adaptation and Microtubule Stability in Rice
Yamamoto E., Takashi T., Morinaka Y., Lin S., Wu J., Matsumoto T., Kitano H., Matsuoka M., Ashikari M.
Mol. Genet. Genomics 2010  283(4)  305-15
Gain of deleterious function causes an autoimmune response and Bateson-Dobzhansky-Muller incompatibility in rice.
Yamamoto E,Takashi T,Morinaka Y,Lin S,Kitano H,Matsuoka M,Ashikari M
Theor. Appl. Genet. 2007  115  187-94
Interaction of two recessive genes, hbd2 and hbd3, induces hybrid breakdown in rice.
Matsubara K,Ando T,Mizubayashi T,Ito S,Yano M
Theor. Appl. Genet. 2007  115  179-86
Identification and linkage mapping of complementary recessive genes causing hybrid breakdown in an intraspecific rice cross.
Duan,K., Li,L., Hu,P., Xu,S.P., Xu,Z.H. and Xue,H.W.
Plant J. 2006  47(4)  519-531
A brassinolide-suppressed rice MADS-box transcription factor, OsMDP1, has a negative regulatory role in BR signaling.
Liu,W., Xu,Z.H., Luo,D. and Xue,H.W.
Plant J. 2003  36(2)  189-202
Roles of OsCKI1, a rice casein kinase I, in root development and plant hormone sensitivity.
TextPresso Search Search textpresso for HBD2 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0080020
オントロジー
Gene Ontology starch catabolic process( GO:0005983 )
regulation of apoptosis( GO:0042981 )
starch metabolic process( GO:0005982 )
carbohydrate metabolic process( GO:0005975 )
abscisic acid mediated signaling( GO:0009738 )
leaf senescence( GO:0010150 )
protein kinase activity( GO:0004672 )
protein serine/threonine kinase activity( GO:0004674 )
protein tyrosine kinase activity( GO:0004713 )
nucleus( GO:0005634 )
protein amino acid phosphorylation( GO:0006468 )
response to brassinosteroid stimulus( GO:0009741 )
root development( GO:0048364 )
ATP binding( GO:0005524 )
multicellular organismal development( GO:0007275 )
unidimensional cell growth( GO:0009826 )
auxin metabolic process( GO:0009850 )
response to cold( GO:0009409 )
auxin biosynthetic process( GO:0009851 )
microtubule cytoskeleton organization( GO:0000226 )
cold acclimation( GO:0009631 )
Trait Ontology root branching( TO:0000257 )
auxin sensitivity( TO:0000163 )
root development trait( TO:0000656 )
root number( TO:0000084 )
leaf angle( TO:0000206 )
abscisic acid sensitivity( TO:0000615 )
cold tolerance( TO:0000303 )
auxin content( TO:0002672 )
plant growth hormone sensitivity( TO:0000401 )
root length( TO:0000227 )
starch content( TO:0000696 )
leaf senescence( TO:0000249 )
leaf color( TO:0000326 )
chlorophyll content( TO:0000495 )
chlorophyll-a content( TO:0000293 )
chlorophyll-b content( TO:0000295 )
hydrogen peroxide content( TO:0000605 )
Plant Ontology root( PO:0009005 )
elongation zone( PO:0020125 )
4 leaf senescence stage( PO:0001054 )
関連系統
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形質画像
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更新日
2022-08-24 13:45:30.693

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