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Basic Information
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CGSNL 遺伝子シンボル
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SCR
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遺伝子シンボルシノニム
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OsSCR, OsSCR2, SCR2, OsGRAS-51, OsGRAS51, GRAS-51, GRAS51
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CGSNL 遺伝子名
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SCARECROW GENE
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遺伝子名シノニム
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rice SCARECROW gene, SCARECROW, Protein SCARECROW 2, GRAS protein 51
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タンパク質名
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PROTEIN SCARECROW 2
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対立遺伝子
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c-osscr2-1, c-osscr2-2, Osscr2, Osscr2-m3, Osscr2-m4, Osscr2-m8, , Osscr2-m9, Osscr2-m10
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染色体番号
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12
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解説
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OsSCR is involved not only in the asymmetric division of the cortex/endodermis progenitor cell in the root, but also in that during stomata and ligule formation by establishing the polarization of cytoplasm. AB180961. Q2QYF3(japonica), A2ZHL0(indica). OsSCR2 in Cui et al. 2007, Wu et al. 2014, Wu et al. 2019, Hughes & Langdale 2022, Hughes et al. 2023. GRO:0007047; 02-seedling.GO:0090351: seedling development. TO:0000949: seedling growth and development trait.
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形質クラス
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栄養器官 - 葉
栄養器官 - 根
QTLの特性 - 植物成長活動
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発現
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葉 - P1 - Formation of leaf primordium
葉 - P2 - Hood-shape primordium
葉 - P3 - Formation of ligule primordium
葉 - P4 - Rapid elongation of leaf blade
根 - Cr1 - Establishment of initial cells
根 - Cr2 - Establishment of epidermis-endodermis, central cylinder and root cap initials
根 - Cr3 - Differentiation of epidermis and endodermis
根 - Cr4 - Differentiation of cortex
根 - Cr5 - Establishment of fundamental organization
根 - Cr6 - Onset of cell elongation and vacuolation
根 - Cr7 - Emergence of crown root
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Sequence/Locus
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cDNA Accession No.
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AK243131
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MSU ID
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LOC_Os12g02870.1
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RAP ID
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Os12g0122000
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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Link to INSD Accession List
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マップ
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位置情報(cM)
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リンケージマップ
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Classical linkage map
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文献
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Hughes T.E., Sedelnikova O., Thomas M., Langdale J.A.
PLoS Genet. 2023 19(4) e1010715
Mutations in NAKED-ENDOSPERM IDD genes reveal functional interactions with SCARECROW during leaf patterning in C4 grasses.
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Hughes T.E., Langdale J.A.
Development 2022 149(7)
SCARECROW is deployed in distinct contexts during rice and maize leaf development.
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Qi D., Wen Q., Meng Z., Yuan S., Guo H., Zhao H., Cui S.
Plant J. 2020 104(4) 901-916
OsLFR is essential for early endosperm and embryo development by interacting with SWI/SNF complex members in Oryza sativa.
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Liu S., Fu H., Jiang J., Chen Z., Gao J., Shu H., Zhang S., Yang C., Liu J.
Front Plant Sci 2019 10 848
Overexpression of a CPYC-Type Glutaredoxin, <i>OsGrxC2.2</i>, Causes Abnormal Embryos and an Increased grain weight in Rice.
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Wu Z., Chen L., Yu Q., Zhou W., Gou X., Li J., Hou S.
New Phytol. 2019 223(1) 220-232
Multiple transcriptional factors control stomata development in rice.
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Huang X., Peng X., Sun M.X.
New Phytol. 2017 215(3) 1039-1058
OsGCD1 is essential for rice fertility and required for embryo dorsal-ventral pattern formation and endosperm development.
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Yi J., Lee Y.S., Lee D.Y., Cho M.H., Jeon J.S., An G.
J. Exp. Bot. 2016 67(8) 2425-37
OsMPK6 plays a critical role in cell differentiation during early embryogenesis in Oryza sativa.
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Wu S., Lee C.M., Hayashi T., Price S., Divol F., Henry S., Pauluzzi G., Perin C., Gallagher K.L.
Proc. Natl. Acad. Sci. U.S.A. 2014
A plausible mechanism, based upon SHORT-ROOT movement, for regulating the number of cortex cell layers in roots.
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Cui H,Levesque MP,Vernoux T,Jung JW,Paquette AJ,Gallagher KL,Wang JY,Blilou I,Scheres B,Benfey PN
Science 2007 316 421-5
An evolutionarily conserved mechanism delimiting SHR movement defines a single layer of endodermis in plants.
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Tian C, Wan P, Sun S, Li J, Chen M.
Plant Mol. Biol. 2004 54 519-532
Genome-wide analysis of the GRAS gene family in rice and Arabidopsis.
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Kamiya,N., Itoh,J., Morikami,A., Nagato,Y. and Matsuoka,M.
Plant J. 2003 36(1) 45-54
The SCARECROW gene's role in asymmetric cell divisions in rice plants.
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TextPresso Search
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Search textpresso for SCR
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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GR:0080035
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オントロジー
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Gene Ontology
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asymmetric cell division( GO:0008356 )
stomatal complex morphogenesis( GO:0010103 )
cytoplasm( GO:0005737 )
transcription( GO:0006350 )
multicellular organismal development( GO:0007275 )
regulation of transcription( GO:0045449 )
stomatal complex development( GO:0010374 )
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Trait Ontology
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stomatal frequency( TO:0000566 )
growth and development trait( TO:0000357 )
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Plant Ontology
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vascular leaf primordium( PO:0000017 )
primary root tip( PO:0000026 )
root cortex-endodermis initial cell( PO:0000060 )
root endodermis( PO:0005059 )
root meristem( PO:0006085 )
meristem L1( PO:0009020 )
ligule( PO:0020105 )
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関連系統
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形質画像
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更新日
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2023-08-22 14:42:07.898
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更新情報
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