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Basic Information
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CGSNL Gene Symbol
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QHB
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Gene Symbol Synonym
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OsQHB, OsWOX9, WOX9, WOX5, Os WOX5, OsWOX5, QHB/OsWOX9
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CGSNL Gene Name
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QUIESCENT-CENTER-SPECIFIC-HOMEOBOX GENE
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Gene Name Synonym
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quiescent-center-specific-homeobox gene, WUSCHEL-related homeobox 9, Protein WOX5, Quiescent-specific homeobox protein
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Protein Name
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QUIESCENT-SPECIFIC HOMEOBOX PROTEIN
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Allele
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qhb, osqhb, osqhb-1, osqhb-2
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Chromosome No.
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1
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Explanation
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This homeobox gene is responsible to the cells in the quiescent center of root apical meristem (RAM). Q8W0F1. AM234751. OsWOX5 in Nardmann and Werr 2006, Cheng et al. 2014, Guo et al. 2018, Hu et al. 2017. GO:1990110: callus formation. GO:2000023: regulation of lateral root development. TO:0000975: grain width. GO:2000377: regulation of reactive oxygen species metabolic process.
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Trait Class
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Vegetative organ - Culm
Vegetative organ - Root
Reproductive organ - panicle
Seed - Morphological traits - Grain shape
Tolerance and resistance - Stress tolerance
Character as QTL - Yield and productivity
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Expression
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Crown root - Cr1 - Establishment of initial cells
Crown root - Cr2 - Establishment of epidermis-endodermis, central cylinder and root cap initials
Crown root - Cr3 - Differentiation of epidermis and endodermis
Crown root - Cr4 - Differentiation of cortex
Crown root - Cr5 - Establishment of fundamental organization
Crown root - Cr6 - Onset of cell elongation and vacuolation
Crown root - Cr7 - Emergence of crown root
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Sequence/Locus
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cDNA Accession No.
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AK102203
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MSU ID
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LOC_Os01g63510.1
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RAP ID
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Os01g0854500
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
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Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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Link to INSD Accession List
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Gonin M., Jeong K., Coudert Y., Lavarenne J., Giang Thi Hoang, Bes M., Huong Thi Mai To, Marie-Rose Ndella Thiaw, Toan Van Do, Moukouanga D., Soazig Guyomarc'h, Bellande K., Jean-Rémy Brossier, Parizot B., Hieu Trang Nguyen, Beeckman T., Véronique Bergougnoux, Rouster J., Sallaud C., Laplaze L., Champion A., Gantet P.
Plant J. 2022 111(2) 546-566
CROWN ROOTLESS1 binds DNA with a relaxed specificity and activates OsROP and OsbHLH044 genes involved in crown root formation in rice.
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Kawai T., Shibata K., Akahoshi R., Nishiuchi S., Takahashi H., Nakazono M., Kojima T., Nosaka-Takahashi M., Sato Y., Toyoda A., Lucob-Agustin N., Kano-Nakata M., Suralta R.R., Niones J.M., Chen Y., Siddique K.H.M., Yamauchi A., Inukai Y.
Proc. Natl. Acad. Sci. U.S.A. 2022 119(1)
<i>WUSCHEL-related homeobox</i> family genes in rice control lateral root primordium size.
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Zhou J., Qiao J., Wang J., Quan R., Huang R., Qin H.
Front Plant Sci 2022 13 848891
OsQHB Improves salt tolerance by Scavenging Reactive Oxygen Species in Rice.
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Chen R., Xu N., Yu B., Wu Q., Li X., Wang G., Huang J.
Plant Sci. 2020 298 110575
The WUSCHEL-related homeobox transcription factor OsWOX4 controls the primary root elongation by activating OsAUX1 in rice.
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Zhao N., Zhang K., Wang C., Yan H., Liu Y., Xu W., Su Z.
Front Genet 2020 11 766
Systematic Analysis of Differential H3K27me3 and H3K4me3 Deposition in Callus and Seedling Reveals the Epigenetic Regulatory Mechanisms Involved in Callus Formation in Rice.
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Guo F., Zhang H., Liu W., Hu X., Han N., Qian Q., Xu L., Bian H.
Plant Cell Physiol. 2018
Callus initiation from root explants employs different strategies in rice and Arabidopsis.
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Hu B., Zhang G., Liu W., Shi J., Wang H., Qi M., Li J., Qin P., Ruan Y., Huang H., Zhang Y., Xu L.
Regeneration (Oxford, England) 2017 4(3) 132-139
Divergent regeneration-competent cells adopt a common mechanism for callus initiation in angiosperms.
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Cheng S., Huang Y., Zhu N., Zhao Y.
Gene 2014 549(2) 266-74
The rice WUSCHEL-related homeobox genes are involved in reproductive organ development, hormone signaling and abiotic stress response.
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Li S., Zhou B., Peng X., Kuang Q., Huang X., Yao J., Du B., Sun M.X.
New Phytol. 2014 201(1) 66-79
OsFIE2 plays an essential role in the regulation of rice vegetative and reproductive development.
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Ohmori Y., Tanaka W., Kojima M., Sakakibara H., Hirano H.Y.
Plant Cell 2013 25(1) 229-41
WUSCHEL-RELATED HOMEOBOX4 is involved in meristem maintenance and is negatively regulated by the CLE gene FCP1 in rice.
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Zhou, Dao-Xiu
Plant Physiol. 2007 144(1) 380-390
A WUSCHEL-LIKE HOMEOBOX Gene Represses a YABBY Gene Expression Required for Rice Leaf Development.
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Nardmann,J., Zimmermann,R., Durantini,D., Kranz,E. and Werr,W.
Mol. Biol. Evol. 2007 24(11) 2474-2484
WOX Gene Phylogeny in Poaceae: A Comparative Approach Addressing Leaf and Embryo Development
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Nardmann,J. and Werr,W.
Mol. Biol. Evol. 2006 23(12) 2492-2504
The shoot stem cell niche in angiosperms: expression patterns of WUS orthologues in rice and maize imply major modifications in the course of mono- and dicot evolution
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Kamiya, N., H. Nagasaki, A. Morikami, Y. Sato and M. Matsuoka
Plant J. 2003 35 (4) 429-441
Isolation and characterization of a rice WUSCHEL-type homeobox gene that is specefically expressed in the central cells of a quiescent center in the root apical meristem.
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TextPresso Search
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Search textpresso for QHB
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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response to ethylene stimulus( GO:0009723 )
response to osmotic stress( GO:0006970 )
lateral root formation( GO:0010311 )
negative regulation of transcription, DNA-dependent( GO:0045892 )
lateral root development( GO:0048527 )
root meristem growth( GO:0010449 )
meristem development( GO:0048507 )
response to wounding( GO:0009611 )
cell division( GO:0051301 )
cell fate commitment( GO:0045165 )
regeneration( GO:0031099 )
sequence-specific DNA binding( GO:0043565 )
multicellular organismal development( GO:0007275 )
transcription( GO:0006350 )
regulation of transcription, DNA-dependent( GO:0006355 )
nucleus( GO:0005634 )
transcription factor activity( GO:0003700 )
response to cytokinin stimulus( GO:0009735 )
response to salt stress( GO:0009651 )
response to water deprivation( GO:0009414 )
response to cold( GO:0009409 )
embryonic development( GO:0009790 )
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Trait Ontology
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salt tolerance( TO:0006001 )
cytokinin sensitivity( TO:0000167 )
plant growth hormone sensitivity( TO:0000401 )
cold tolerance( TO:0000303 )
drought tolerance( TO:0000276 )
embryo development trait( TO:0000620 )
root thickness( TO:0000306 )
plant height( TO:0000207 )
tiller number( TO:0000346 )
panicle length( TO:0000040 )
grain length( TO:0000734 )
grain size( TO:0000397 )
1000-seed weight( TO:0000382 )
hydrogen peroxide content( TO:0000605 )
osmotic response sensitivity( TO:0000095 )
ethylene sensitivity( TO:0000173 )
yield trait( TO:0000371 )
grain yield( TO:0000396 )
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Plant Ontology
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shoot-borne root primordium( PO:0025480 )
root stele( PO:0020124 )
root apical meristem( PO:0020147 )
shoot apical meristem( PO:0020148 )
lateral root primordium formation stage( PO:0007511 )
quiescent center( PO:0020149 )
lateral root primordium( PO:0000016 )
pericycle cell( PO:0025261 )
2 root meristem formation stage( PO:0007527 )
root development stage( PO:0007520 )
root tip( PO:0000025 )
stem base( PO:0008039 )
plant callus( PO:0005052 )
root primordium( PO:0005029 )
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Related Strains
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Phenotype images
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Last updated
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Nov 14, 2022
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