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Basic Information
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CGSNL Gene Symbol
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DREB1C
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Gene Symbol Synonym
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OsDREB1C, CBF1, ERF26, OsERF026, OsERF#026, OsERF26, AP2/EREBP#098, AP2/EREBP98, OsCBF2, CBF2
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CGSNL Gene Name
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DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1C
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Gene Name Synonym
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Dehydration-responsive element-binding protein 1C, Protein DREB1C, Protein C-repeat-binding factor 1, ethylene response factor 26, APETALA2/ethylene-responsive element binding protein 98, C-REPEAT BINDING FACTOR 1
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Protein Name
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DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1C
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Allele
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Chromosome No.
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6
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Explanation
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A2Y8S6(indica), Q9LWV3(japonica). AY327040. OsCBF2 in Wan et al. 2023. TO:0000975: grain width. GO:0090548: response to nitrate starvation. TO:0020100: nitrate uptake. GO:0090408: phloem nitrate loading. TO:0020093: nitrogen content. TO:0000952: stem weight.
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Trait Class
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Reproductive organ - Heading date
Coloration - Chlorophyll
Coloration - Others
Seed - Morphological traits - Grain shape
Tolerance and resistance - Stress tolerance
Character as QTL - Yield and productivity
Character as QTL - Plant growth activity
Other
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Expression
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Sequence/Locus
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cDNA Accession No.
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AY327040
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MSU ID
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LOC_Os06g03670.1
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RAP ID
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Os06g0127100
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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Link to INSD Accession List
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Deng D., Guo Y., Guo L., Li C., Nie Y., Wang S., Wu W.
Mol. Biol. Evol. 2024 41(5)
Functional Divergence in Orthologous Transcription Factors: Insights from AtCBF2/3/1 and OsDREB1C.
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Singh P., Sundaram K.T., Vinukonda V.P., Venkateshwarlu C., Paul P.J., Pahi B., Gurjar A., Singh U.M., Kalia S., Kumar A., Singh V.K., Sinha P.
Commun Biol 2024 7(1) 89
Superior haplotypes of key drought-responsive genes reveal opportunities for the development of climate-resilient rice varieties.
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Ouyang Q., Zhang Y., Yang X., Yang C., Hou D., Liu H., Xu H.
Plants (Basel) 2023 12(15)
Overexpression of <i>OsPIN9</i> Impairs Chilling Tolerance via Disturbing ROS Homeostasis in Rice.
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Wan J., Zhang J., Zan X., Zhu J., Chen H., Li X., Zhou Z., Gao X., Chen R., Huang Z., Xu Z., Li L.
Plants (Basel) 2023 12(13)
Overexpression of Rice Histone H1 Gene Reduces Tolerance to Cold and Heat Stress.
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Gu S., Zhang Z., Li J., Sun J., Cui Z., Li F., Zhuang J., Chen W., Su C., Wu L., Wang X., Guo Z., Xu H., Zhao M., Ma D., Chen W.
Plant Physiol. 2023
Natural variation in OsSEC13 HOMOLOG 1 modulates redox homeostasis to confer cold tolerance in rice.
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Zhou Z., Liu J., Meng W., Sun Z., Tan Y., Liu Y., Tan M., Wang B., Yang J.
Plants (Basel) 2023 12(19)
Integrated Analysis of Transcriptome and Metabolome Reveals Molecular Mechanisms of Rice with Different Salinity Tolerances.
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Huo C., Zhang B., Wang R.
Plant Signal Behav 2022 17(1) 2004035
Research progress on plant noncoding RNAs in response to low-temperature stress.
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Wei S., Li X., Lu Z., Zhang H., Ye X., Zhou Y., Li J., Yan Y., Pei H., Duan F., Wang D., Chen S., Wang P., Zhang C., Shang L., Zhou Y., Yan P., Zhao M., Huang J., Bock R., Qian Q., Zhou W.
Science 2022 377(6604) eabi8455
A transcriptional regulator that boosts grain yields and shortens the growth duration of rice.
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Prodhan Z.H., Islam S.A., Alam M.S., Li S., Jiang M., Tan Y., Shu Q.
Plants (Basel) 2022 11(21)
Impact of <i>OsBadh2</i> Mutations on Salt Stress Response in Rice.
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Jia M., Meng X., Song X., Zhang D., Kou L., Zhang J., Jing Y., Liu G., Liu H., Huang X., Wang Y., Yu H., Li J.
Cell Discov 2022 8(1) 71
Chilling-induced phosphorylation of ipa1 by OsSAPK6 activates chilling tolerance responses in rice.
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Freeg H.A., Attia K.A., Casson S., Fiaz S., Ramadan E.A., Banna A.E., Zoulias N., Aboshosha A., Alamery S.
PLoS ONE 2022 17(3) e0266087
Physio-biochemical responses and expressional profiling analysis of drought tolerant genes in new promising rice genotype.
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Mohanty B.
Front Genet 2021 12 639654
Promoter Architecture and Transcriptional Regulation of Genes Upregulated in Germination and Coleoptile Elongation of Diverse Rice Genotypes Tolerant to Submergence.
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Xu K., Chen S., Li T., Yu S., Zhao H., Liu H., Luo L.
Front Plant Sci 2021 12 711271
Overexpression of OsHMGB707, a High Mobility Group Protein, Enhances Rice drought tolerance by Promoting Stress-Related Gene Expression.
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Xia C., Gong Y., Chong K., Xu Y.
Plant Cell Environ. 2021 44(2) 491-505
Phosphatase OsPP2C27 directly dephosphorylates OsMAPK3 and OsbHLH002 to negatively regulate cold tolerance in rice.
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Shi Y., Chang Y.L., Wu H.T., Shalmani A., Liu W.T., Li W.Q., Xu J.W., Chen K.M.
Plant Cell Rep. 2020 39(12) 1767-1784
OsRbohB-mediated ROS production plays a crucial role in drought stress tolerance of rice.
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Moon S.J., Min M.K., Kim J.A., Kim D.Y., Yoon I.S., Kwon T.R., Byun M.O., Kim B.G.
Front Plant Sci 2019 10 297
Ectopic Expression of <i>OsDREB1G</i>, a Member of the OsDREB1 Subfamily, Confers Cold Stress Tolerance in Rice.
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Zhang D., Wang Y., Shen J., Yin J., Li D., Gao Y., Xu W., Liang J.
Rice (N Y) 2018 11(1) 45
OsRACK1A, encodes a circadian clock-regulated WD40 protein, negatively affect salt tolerance in rice.
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Zhang Y., Liu K., Zhu X., Wu Y., Zhang S., Chen H., Ling J., Wang Y., Fang X.
Plant Cell Rep. 2018 37(5) 775-787
Rice tocopherol deficiency 1 encodes a homogentisate phytyltransferase essential for tocopherol biosynthesis and plant development in rice.
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Song J., Li J., Sun J., Hu T., Wu A., Liu S., Wang W., Ma D., Zhao M.
Front Plant Sci 2018 9 875
Genome-Wide Association Mapping for cold tolerance in a Core Collection of Rice (<i>Oryza sativa</i> L.) Landraces by Using High-Density Single Nucleotide Polymorphism Markers From Specific-Locus Amplified Fragment Sequencing.
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Jung H., Chung P.J., Park S.H., Redillas M.C., Kim Y.S., Suh J.W., Kim J.K.
Plant Biotechnol. J. 2017
Overexpression of OsERF48 causes regulation of OsCML16, a calmodulin-like protein gene that enhances root growth and drought tolerance.
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Lee D.K., Kim H.I., Jang G., Chung P.J., Jeong J.S., Kim Y.S., Bang S.W., Jung H., Choi Y.D., Kim J.K.
Plant Sci. 2015 241 199-210
The NF-YA transcription factor OsNF-YA7 confers drought stress tolerance of rice in an abscisic acid independent manner.
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Zhang F., Huang L., Wang W., Zhao X., Zhu L., Fu B., Li Z.
BMC Genomics 2012 13(1) 461
Genome-wide gene expression profiling of introgressed indica rice alleles associated with seedling cold tolerance improvement in a japonica rice background.
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Rashid M., Guangyuan H., Guangxiao Y., Hussain J., Xu Y.
Evol. Bioinform. Online 2012 8 321-355
AP2/ERF Transcription Factor in Rice: Genome-Wide Canvas and Syntenic Relationships between Monocots and Eudicots.
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Mao D., Chen C.
PLoS ONE 2012 7(10) e47275
Colinearity and similar expression pattern of rice DREB1s reveal their functional conservation in the cold-responsive pathway.
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Seo J.S. , Joo J. , Kim M.J. , Kim Y.K. , Nahm B.H. , Song S.I. , Cheong J.J. , Lee J.S. , Kim J.K. , Choi Y.D.
Plant J. 2011 65(6) 907-21
OsbHLH148, a basic helix-loop-helix protein, interacts with OsJAZ proteins in a jasmonate signaling pathway leading to drought tolerance in rice.
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Lata C., Prasad M.
J. Exp. Bot. 2011 62(14) 4731-48
Role of DREBs in regulation of abiotic stress responses in plants.
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Jung KH,Seo YS,Walia H,Cao P,Fukao T,Canlas PE,Amonpant F,Bailey-Serres J,Ronald PC
Plant Physiol. 2010 152 1674-92
The submergence tolerance regulator Sub1A mediates stress-responsive expression of AP2/ERF transcription factors.
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Nakano T, Suzuki K, Fujimura T, Shinshi H.
Plant Physiol. 2006 140(2) 411-32
Genome-wide analysis of the ERF gene family in Arabidopsis and rice.
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Kazuko Yamaguchi-Shinozaki, Shinozaki K.
Annu Rev Plant Biol 2006 57 781-803
Transcriptional regulatory networks in cellular responses and tolerance to dehydration and cold stresses.
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Dubouzet,J.G., Sakuma,Y., Ito,Y., Kasuga,M., Dubouzet,E.G., Miura,S., Seki,M., Shinozaki,K. and Yamaguchi-Shinozaki,K.
Plant J. 2003 33(4) 751-763
OsDREB genes in rice, Oryza sativa L., encode transcription activators that function in drought-, high-salt- and cold-responsive gene expression.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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response to light stimulus( GO:0009416 )
cellular response to nitrogen starvation( GO:0006995 )
response to starvation( GO:0042594 )
cytosol( GO:0005829 )
chloroplast organization( GO:0009658 )
phloem loading( GO:0009915 )
nitrate transport( GO:0015706 )
nitrate assimilation( GO:0042128 )
response to nutrient levels( GO:0031667 )
nitrogen utilization( GO:0019740 )
positive regulation of long-day photoperiodism, flowering( GO:0048578 )
photoperiodism, flowering( GO:0048573 )
positive regulation of transcription, DNA-dependent( GO:0045893 )
response to deep water( GO:0030912 )
response to stress( GO:0006950 )
regulation of transcription, DNA-dependent( GO:0006355 )
transcription factor activity( GO:0003700 )
nucleus( GO:0005634 )
transcription( GO:0006350 )
response to cold( GO:0009409 )
response to water deprivation( GO:0009414 )
response to wounding( GO:0009611 )
response to salt stress( GO:0009651 )
response to abscisic acid stimulus( GO:0009737 )
response to flooding( GO:0009413 )
response to cadmium ion( GO:0046686 )
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Trait Ontology
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drought tolerance( TO:0000276 )
salt tolerance( TO:0006001 )
cold tolerance( TO:0000303 )
abscisic acid sensitivity( TO:0000615 )
flooding related trait( TO:0000114 )
submergence tolerance( TO:0000524 )
relative yield( TO:0000153 )
light sensitivity( TO:0000075 )
nitrogen sensitivity( TO:0000011 )
days to heading( TO:0000137 )
grain yield per plant( TO:0000449 )
secondary branch number( TO:0000557 )
grain length( TO:0000734 )
grain thickness( TO:0000399 )
seed density( TO:0000612 )
filled grain number( TO:0000447 )
1000-seed weight( TO:0000382 )
grain yield( TO:0000396 )
harvest index( TO:0000128 )
photosynthetic ability( TO:0000316 )
carbon content( TO:0000466 )
protein content( TO:0000598 )
seed quality( TO:0000162 )
chlorophyll content( TO:0000495 )
carotenoid content( TO:0000496 )
stomatal conductance( TO:0000522 )
chloroplast development trait( TO:0002715 )
starch content( TO:0000696 )
sucrose content( TO:0000328 )
fructose content( TO:0006005 )
root length( TO:0000227 )
auxin content( TO:0002672 )
growth and development trait( TO:0000357 )
water use efficiency( TO:0001017 )
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Plant Ontology
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Related Strains
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Phenotype images
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Last updated
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Feb 24, 2025
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