Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol DREB1A
Gene Symbol Synonym OsDREB1A, Os DREB1A, CBF3, OsCBF3, OsDREB1A/OsCBF3, ERF24, OsERF24, OsERF024, OsERF#024, AP2/EREBP#114, AP2/EREBP114, OsDREBL
CGSNL Gene Name DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1A
Gene Name Synonym Dehydration-responsive element-binding protein 1A, Protein DREB1A, Protein C-repeat-binding factor 3, ethylene response factor 24, APETALA2/ethylene-responsive element binding protein 114
Protein Name DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1A
Allele
Chromosome No. 9
Explanation Expression of OsDREB1A is induced by cold. JN561151. A2Z389(indica), Q64MA1(japonica). AF300970. AY345233. AF494422. ObDREB1a is the orthologous gene in O. brachyantha. OsDREBL in Chen et al. 2003 and Lata, Prasad 2011 and Man et al. 2016.
Trait Class Tolerance and resistance - Stress tolerance
Other
Expression
Sequence/Locus
cDNA Accession No. AK105599
MSU ID LOC_Os09g35030.1
RAP ID Os09g0522200
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Tang Y., Bao X., Zhi Y., Wu Q., Guo Y., Yin X., Zeng L., Li J., Zhang J., He W., Liu W., Wang Q., Jia C., Li Z., Liu K.
Front Plant Sci 2019  10  168
Overexpression of a MYB Family Gene, <i>OsMYB6</i>, Increases Drought and Salinity Stress Tolerance in Transgenic Rice.
Moon S.J., Min M.K., Kim J.A., Kim D.Y., Yoon I.S., Kwon T.R., Byun M.O., Kim B.G.
Front Plant Sci 2019  10  297
Ectopic Expression of <i>OsDREB1G</i>, a Member of the OsDREB1 Subfamily, Confers Cold Stress Tolerance in Rice.
Um T.Y., Lee H.Y., Lee S., Chang S.H., Chung P.J., Oh K.B., Kim J.K., Jang G., Choi Y.D.
Front Plant Sci 2018  9  1866
JASMONATE ZIM-DOMAIN PROTEIN 9 Interacts With Slender Rice 1 to Mediate the Antagonistic Interaction Between Jasmonic and Gibberellic Acid Signals in Rice.
Cui L.H., Min H.J., Byun M.Y., Oh H.G., Kim W.T.
Front Plant Sci 2018  9  1797
OsDIRP1, a Putative RING E3 Ligase, Plays an Opposite Role in Drought and Cold Stress Responses as a Negative and Positive Factor, Respectively, in Rice (<i>Oryza sativa</i> L.).
Liang J., Guo S., Sun B., Liu Q., Chen X., Peng H., Zhang Z., Xie Q.
Rice (N Y) 2018  11(1)  59
Constitutive expression of REL1 confers the rice response to drought stress and abscisic acid.
Zhang D., Wang Y., Shen J., Yin J., Li D., Gao Y., Xu W., Liang J.
Rice (N Y) 2018  11(1)  45
OsRACK1A, encodes a circadian clock-regulated WD40 protein, negatively affect salt tolerance in rice.
Minh-Thu PT., Kim J.S., Chae S., Jun K.M., Lee G.S., Kim D.E., Cheong J.J., Song S.I., Nahm B.H., Kim Y.K.
Mol. Cells 2018  41(8)  781-798
A WUSCHEL Homeobox Transcription Factor, OsWOX13, Enhances Drought Tolerance and Triggers Early Flowering in Rice.
Yuenyong W., Chinpongpanich A., Comai L., Chadchawan S., Buaboocha T.
BMC Plant Biol. 2018  18(1)  335
Downstream components of the calmodulin signaling pathway in the rice salt stress response revealed by transcriptome profiling and target identification.
Zhang Y., Liu K., Zhu X., Wu Y., Zhang S., Chen H., Ling J., Wang Y., Fang X.
Plant Cell Rep. 2018  37(5)  775-787
Rice tocopherol deficiency 1 encodes a homogentisate phytyltransferase essential for tocopherol biosynthesis and plant development in rice.
Fu J., Wu H., Ma S., Xiang D., Liu R., Xiong L.
Front Plant Sci 2017  8  2108
OsJAZ1 Attenuates Drought Resistance by Regulating JA and ABA Signaling in Rice.
Yuan J., Meng J., Liang X., E Y., Yang X., Chen W.
Front Plant Sci 2017  8  1624
Organic Molecules from Biochar Leacheates Have a Positive Effect on Rice Seedling cold tolerance.
Borah P., Sharma E., Kaur A., Chandel G., Mohapatra T., Kapoor S., Khurana J.P.
Sci Rep 2017  7  42131
Analysis of drought-responsive signalling network in two contrasting rice cultivars using transcriptome-based approach.
Huo C., Zhang B., Wang H., Wang F., Liu M., Gao Y., Zhang W., Deng Z., Sun D., Tang W.
Mol. Cell Proteomics 2016  15(4)  1397-411
Comparative Study of Early Cold-Regulated Proteins by Two-Dimensional Difference Gel Electrophoresis Reveals a Key Role for Phospholipase Dalpha1 in Mediating Cold Acclimation Signaling Pathway in Rice.
He X., Li L., Xu H., Xi J., Cao X., Xu H., Rong S., Dong Y., Wang C., Chen R., Xu J., Gao X., Xu Z.
Plant Biol (Stuttg) 2016   
A rice jacalin-related mannose-binding lectin gene, OsJRL, enhances Escherichia coli viability under high salinity stress and improves salinity tolerance of rice.
Man L., Xiang D., Wang L., Zhang W., Wang X., Qi G.
Protoplasma 2016   
Stress-responsive gene RsICE1 from Raphanus sativus increases cold tolerance in rice.
Kakar K.U., Ren X.L., Nawaz Z., Cui Z., Li B., Xie G., Hassan M.A., Ali E., Sun G.
Plant Biol (Stuttg) 2015   
Consortium of rhizobacterial strains and biochemical growth elicitors improve cold and drought stress tolerance in rice (Oryza sativa L.).
Li J., Qin R.Y., Li H., Xu R.F., Yang Y.C., Ni D.H., Ma H., Li L., Wei P.C., Yang J.B.
Front Plant Sci 2015  6  1011
Low-Temperature-Induced Expression of rice ureidoglycolate amidohydrolase is Mediated by a C-Repeat/Dehydration-Responsive Element that Specifically Interacts with Rice C-Repeat-Binding Factor 3.
Chen M., Zhao Y., Zhuo C., Lu S., Guo Z.
Plant Biotechnol. J. 2014   
Overexpression of a NF-YC transcription factor from bermudagrass confers tolerance to drought and salinity in transgenic rice.
Chen X., Wang Y., Lv B., Li J., Luo L., Lu S., Zhang X., Ma H., Ming F.
Plant Cell Physiol. 2014  55(3)  604-19
The NAC Family Transcription Factor OsNAP Confers Abiotic Stress Response Through the ABA Pathway.
Suzuki K., Aoki N., Matsumura H., Okamura M., Ohsugi R., Shimono H.
Plant Cell Environ. 2014   
Cooling water before panicle initiation increases chilling-induced male sterility and disables chilling-induced expression of genes encoding OsFKBP65 and heat shock proteins in rice spikelets.
Lourenço T., Sapeta H., Figueiredo D.D., Rodrigues M., Cordeiro A., Abreu I.A., Saibo N.J., Oliveira M.M.
Plant Mol. Biol. 2013  83(4-5)  351-63
Isolation and characterization of rice (Oryza sativa L.) E3-ubiquitin ligase OsHOS1 gene in the modulation of cold stress response.
Rashid M., Guangyuan H., Guangxiao Y., Hussain J., Xu Y.
Evol. Bioinform. Online 2012  8  321-355
AP2/ERF Transcription Factor in Rice: Genome-Wide Canvas and Syntenic Relationships between Monocots and Eudicots.
Todaka D., Nakashima K., Shinozaki K., Kazuko Yamaguchi-Shinozaki
Rice (N Y) 2012  5  6
Toward understanding transcriptional regulatory networks in abiotic stress responses and tolerance in rice.
Mao D., Chen C.
PLoS ONE 2012  7(10)  e47275
Colinearity and similar expression pattern of rice DREB1s reveal their functional conservation in the cold-responsive pathway.
Huang J., Sun S., Xu D., Lan H., Sun H., Wang Z., Bao Y., Wang J., Tang H., Zhang H.
Plant Mol. Biol. 2012  80(3)  337-50
A TFIIIA-type zinc finger protein confers multiple abiotic stress tolerances in transgenic rice (Oryza sativa L.).
Ben Saad R., Fabre D., Mieulet D., Meynard D., Dingkuhn M., Al-Doss A., Guiderdoni E., Hassairi A.
Plant Cell Environ. 2012  35(3)  626-43
Expression of the Aeluropus littoralis AlSAP gene in rice confers broad tolerance to abiotic stresses through maintenance of photosynthesis.
Zhang F., Huang L., Wang W., Zhao X., Zhu L., Fu B., Li Z.
BMC Genomics 2012  13(1)  461
Genome-wide gene expression profiling of introgressed indica rice alleles associated with seedling cold tolerance improvement in a japonica rice background.
Lata C., Prasad M.
J. Exp. Bot. 2011  62(14)  4731-48
Role of DREBs in regulation of abiotic stress responses in plants.
Seo J.S. , Joo J. , Kim M.J. , Kim Y.K. , Nahm B.H. , Song S.I. , Cheong J.J. , Lee J.S. , Kim J.K. , Choi Y.D.
Plant J. 2011  65(6)  907-21
OsbHLH148, a basic helix-loop-helix protein, interacts with OsJAZ proteins in a jasmonate signaling pathway leading to drought tolerance in rice.
Tao Z., Kou Y., Liu H., Li X., Xiao J., Wang S.
J. Exp. Bot. 2011  62(14)  4863-74
OsWRKY45 alleles play different roles in abscisic acid signalling and salt stress tolerance but similar roles in drought and cold tolerance in rice.
Fukao T,Yeung E,Bailey-Serres J
Plant Cell 2011  23(1)  412-27
The Submergence Tolerance Regulator SUB1A Mediates Crosstalk between Submergence and Drought Tolerance in Rice.
Ahmadi N., Negrão S., Katsantonis D., Frouin J., Ploux J., Letourmy P., Droc G., Babo P., Trindade H., Bruschi G., Greco R., Oliveira M.M., Piffanelli P., Courtois B.
Theor. Appl. Genet. 2011  123(6)  881-95
Targeted association analysis identified japonica rice varieties achieving Na(+)/K (+) homeostasis without the allelic make-up of the salt tolerant indica variety Nona Bokra.
Su CF,Wang YC,Hsieh TH,Lu CA,Tseng TH,Yu SM
Plant Physiol. 2010  153  145-58
A novel MYBS3-dependent pathway confers cold tolerance in rice.
Jung KH,Seo YS,Walia H,Cao P,Fukao T,Canlas PE,Amonpant F,Bailey-Serres J,Ronald PC
Plant Physiol. 2010  152  1674-92
The submergence tolerance regulator Sub1A mediates stress-responsive expression of AP2/ERF transcription factors.
Xu,D.Q., Huang,J., Guo,S.Q., Yang,X., Bao,Y.M., Tang,H.J. and Zhang,H.S.
FEBS Lett. 2008  582  1037-1043
Overexpression of a TFIIIA-type zinc finger protein gene ZFP252 enhances drought and salt tolerance in rice (Oryza sativa L.)
Zhang,S., Gu,Y.Q., Singh,J., Coleman-Derr,D., Brar,D.S., Jiang,N. and Lemaux,P.G.
Plant Mol. Biol. 2007  64(5)  589-600
New insights into Oryza genome evolution: high gene colinearity and differential retrotransposon amplification
Kazuko Yamaguchi-Shinozaki, Shinozaki K.
Annu Rev Plant Biol 2006  57  781-803
Transcriptional regulatory networks in cellular responses and tolerance to dehydration and cold stresses.
Nakano T, Suzuki K, Fujimura T, Shinshi H.
Plant Physiol. 2006  140(2)  411-32
Genome-wide analysis of the ERF gene family in Arabidopsis and rice.
Ito Y, Katsura K, Maruyama K, Taji T, Kobayashi M, Seki M, Shinozaki K, Yamaguchi-Shinozaki K.
Plant Cell Physiol. 2006  47(1)  141-53
Functional analysis of rice DREB1/CBF-type transcription factors involved in cold-responsive gene expression in transgenic rice.
Jian-Quan Chen, Dong Y., Yu-Jun Wang, Liu Q., Jin-Song Zhang, Shou-Yi Chen
Theor. Appl. Genet. 2003  107(6)  972-9
An AP2/EREBP-type transcription-factor gene from rice is cold-inducible and encodes a nuclear-localized protein.
Dubouzet,J.G., Sakuma,Y., Ito,Y., Kasuga,M., Dubouzet,E.G., Miura,S., Seki,M., Shinozaki,K. and Yamaguchi-Shinozaki,K.
Plant J. 2003  33(4)  751-763
OsDREB genes in rice, Oryza sativa L., encode transcription activators that function in drought-, high-salt- and cold-responsive gene expression.
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DB Reference
Gramene ID -
Ontologies
Gene Ontology response to jasmonic acid stimulus( GO:0009753 )
response to gibberellin stimulus( GO:0009739 )
nucleus( GO:0005634 )
transcription( GO:0006350 )
transcription factor activity( GO:0003700 )
regulation of transcription, DNA-dependent( GO:0006355 )
response to cold( GO:0009409 )
response to wounding( GO:0009611 )
response to salt stress( GO:0009651 )
response to symbiotic bacterium( GO:0009609 )
response to salicylic acid stimulus( GO:0009751 )
response to stress( GO:0006950 )
response to water deprivation( GO:0009414 )
Trait Ontology stress trait( TO:0000164 )
cold tolerance( TO:0000303 )
salt tolerance( TO:0006001 )
drought tolerance( TO:0000276 )
gibberellic acid sensitivity( TO:0000166 )
jasmonic acid sensitivity( TO:0000172 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Aug 31, 2019


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/rice/oryzabase