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Basic Information
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CGSNL 遺伝子シンボル
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HDAC1
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遺伝子シンボルシノニム
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OsHDAC1, HDA702, OsHDA702, HDA1, OsHDA1, HDT702, OsHDT702
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CGSNL 遺伝子名
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CLASS-1 TYPE HISTONE DEACETYLASE 1
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遺伝子名シノニム
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class-1 type histone deacetylase 1, histone deacetylase 1, histone deacetylase 702
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タンパク質名
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CLASS-1 TYPE HISTONE DEACETYLASE 1
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対立遺伝子
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染色体番号
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6
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解説
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This gene controls histone deacetylase. This gene widely expressed in the leaves, roots, and callus cells. AF513382. Q7Y0Y8. RPD/HDA1 family.
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形質クラス
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生化学的性質
栄養器官 - 葉
栄養器官 - 稈
栄養器官 - 根
耐性、抵抗性 - 病気抵抗性
耐性、抵抗性 - ストレス耐性
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発現
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Sequence/Locus
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cDNA Accession No.
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AK068051
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MSU ID
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LOC_Os06g38470.1
LOC_Os06g38470.2
LOC_Os06g38470.3
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RAP ID
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Os06g0583400
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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Link to INSD Accession List
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マップ
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位置情報(cM)
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リンケージマップ
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Classical linkage map
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文献
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Hou J., Ren R., Xiao H., Chen Z., Yu J., Zhang H., Shi Q., Hou H., He S., Li L.
Planta 2021 253(3) 72
Characteristic and evolution of HAT and HDAC genes in Gramineae genomes and their expression analysis under diverse stress in Oryza sativa.
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Wang R., Wang H.L., Tang R.P., Sun M.Y., Chen T.M., Duan X.C., Lu X.F., Liu D., Shi X.C., Laborda P., Wang S.Y.
Plants (Basel) 2020 9(12)
<i>Pseudomonas putida</i> Represses JA- and SA-Mediated Defense Pathways in Rice and Promotes an Alternative Defense Mechanism Possibly through ABA Signaling.
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Xu P., Ali A., Han B., Wu X.
Front Plant Sci 2018 9 1528
Current Advances in Molecular Basis and Mechanisms Regulating Leaf Morphology in Rice.
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Cheng X., Zhang S., Tao W., Zhang X., Liu J., Sun J., Zhang H., Pu L., Huang R., Chen T.
Plant Physiol. 2018 178(2) 824-837
INDETERMINATE SPIKELET1 Recruits Histone Deacetylase and a Transcriptional Repression Complex to Regulate Rice salt tolerance.
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Tang N., Ma S., Zong W., Yang N., Lv Y., Yan C., Guo Z., Li J., Li X., Xiang Y., Song H., Xiao J., Li X., Xiong L.
Plant Cell 2016
MODD mediates deactivation and degradation of OsbZIP46 to negatively regulate ABA signaling and drought resistance in rice.
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Chung PJ,Kim JK
Plant Signal Behav 2009 4(7) 675-7
Epigenetic interaction of OsHDAC1 with the OsNAC6 gene promoter regulates rice root growth.
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Hu Y,Qin F,Huang L,Sun Q,Li C,Zhao Y,Zhou DX
Biochem. Biophys. Res. Commun. 2009 388 266-71
Rice histone deacetylase genes display specific expression patterns and developmental functions.
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Chung PJ,Kim YS,Jeong JS,Park SH,Nahm BH,Kim JK
Plant J. 2009 59 764-76
The histone deacetylase OsHDAC1 epigenetically regulates the OsNAC6 gene that controls seedling root growth in rice.
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Jang, I.C., Y.M. Park, S.I. Song, H.J. Kwon, B.H. Nahm and J.K. Kim
Plant J. 2003 33 (3) 531-541
Structure and expression of the rice class-1 type histone deacetylase genes OsHDAC1-3: OsHDAC1 overexpression in transgenic plants leads to increased growth rate and altered architecture.
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TextPresso Search
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Search textpresso for HDAC1
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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-
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オントロジー
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Gene Ontology
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response to cold( GO:0009409 )
response to salt stress( GO:0009651 )
response to bacterium( GO:0009617 )
auxin mediated signaling pathway( GO:0009734 )
root development( GO:0048364 )
histone deacetylase activity( GO:0004407 )
chromatin remodeling( GO:0006338 )
transcription corepressor activity( GO:0003714 )
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Trait Ontology
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root length( TO:0000227 )
leaf width( TO:0000370 )
stem thickness( TO:0000339 )
root development trait( TO:0000656 )
cold tolerance( TO:0000303 )
salt tolerance( TO:0006001 )
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Plant Ontology
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root development stage( PO:0007520 )
carpel( PO:0009030 )
inflorescence( PO:0009049 )
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関連系統
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形質画像
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更新日
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2023-02-20 09:46:32.468
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更新情報
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