Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol MADS57
Gene Symbol Synonym OsMADS57, MADS-57
CGSNL Gene Name MADS BOX GENE 57
Gene Name Synonym MADS box gene57, MADS-box transcription factor 57
Protein Name MADS-BOX TRANSCRIPTION FACTOR 57
Allele osmads57, osmads57-1, OsMADS57R
Chromosome No. 2
Explanation Q6Z6W2. one of the miR444 target genes. TO:0020098: nitrate sensitivity. TO:0020094: nitrate content. TO:0020103: adventitious root length. GO:1900458: negative regulation of brassinosteroid mediated signaling pathway. GO:2000280: regulation of root development.
Trait Class Vegetative organ - Leaf
Vegetative organ - Culm
Vegetative organ - Root
Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance
Other
Expression
Sequence/Locus
cDNA Accession No. AK108784
MSU ID LOC_Os02g49840.1
LOC_Os02g49840.2
LOC_Os02g49840.3
LOC_Os02g49840.4
RAP ID Os02g0731200
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Lyu J., Huang L., Zhang S., Zhang Y., He W., Zeng P., Zeng Y., Huang G., Zhang J., Ning M., Bao Y., Zhao S., Fu Q., Wade L.J., Chen H., Wang W., Hu F.
Nat Commun 2020  11(1)  725
Neo-functionalization of a Teosinte branched 1 homologue mediates adaptations of upland rice.
Jiao X., Wang H., Yan J., Kong X., Liu Y., Chu J., Chen X., Fang R., Yan Y.
Plant Physiol. 2020  182(3)  1454-1466
Promotion of BR Biosynthesis by miR444 Is Required for Ammonium-Triggered Inhibition of Root Growth.
Yin X., Liu X., Xu B., Lu P., Dong T., Yang D., Ye T., Feng Y.Q., Wu Y.
J. Exp. Bot. 2019  70(15)  3895-3909
OsMADS18, a membrane-bound MADS-box transcription factor, modulates plant architecture and the abscisic acid response in rice.
Huang S., Liang Z., Chen S., Sun H., Fan X., Wang C., Xu G., Zhang Y.
Plant Physiol. 2019  180(2)  882-895
A Transcription Factor, OsMADS57, Regulates Long-Distance Nitrate Transport and Root Elongation.
Wei J., Zheng Y., Feng H., Qu H., Fan X., Yamaji N., Ma J.F., Xu G.
J. Exp. Bot. 2018  69(5)  1095-1107
OsNRT2.4 encodes a dual-affinity nitrate transporter and functions in nitrate-regulated root growth and nitrate distribution in rice.
Zhang N., Yu H., Yu H., Cai Y., Huang L., Xu C., Xiong G., Meng X., Wang J., Chen H., Liu G., Jing Y., Yuan Y., Liang Y., Li S., Smith S.M., Li J., Wang Y.
Plant Cell 2018  30(7)  1461-1475
A Core Regulatory Pathway Controlling Rice tiller angle Mediated by the <i>LAZY1</i>-Dependent Asymmetric Distribution of Auxin.
Wang H., Jiao X., Kong X., Hamera S., Wu Y., Chen X., Fang R., Yan Y.
Plant Physiol. 2016  170(4)  2365-77
A Signaling Cascade from miR444 to RDR1 in Rice Antiviral RNA Silencing Pathway.
Yan Y., Wang H., Hamera S., Chen X., Fang R.
Plant J. 2014  78(1)  44-55
miR444a has multiple functions in the rice nitrate-signaling pathway.
Liang W., Shang F., Lin Q., Lou C., Zhang J.
Gene 2014  537(1)  1-5
Tillering and panicle branching genes in rice.
Puig J., Meynard D., Khong G.N., Pauluzzi G., Guiderdoni E., Gantet P.
Gene Expr. Patterns 2013  13(5-6)  160-170
Analysis of the expression of the AGL17-like clade of MADS-box transcription factors in rice.
Guo S., Xu Y., Liu H., Mao Z., Zhang C., Ma Y., Zhang Q., Meng Z., Chong K.
Nat Commun 2013  4  1566
The interaction between OsMADS57 and OsTB1 modulates rice tillering via DWARF14.
Arora R., Agarwal P., Ray S., Ashok Kumar Singh, Vijay Pal Singh, Akhilesh K Tyagi, Kapoor S.
BMC Genomics 2007  8  242
MADS-box gene family in rice: genome-wide identification, organization and expression profiling during reproductive development and stress.
Lee,S., Kim,J., Son,J.S., Nam,J., Jeong,D.H., Lee,K., Jang,S., Yoo,J., Lee,J., Lee,D.Y., Kang,H.G. and An,G.
Plant Cell Physiol. 2003  44(12)  1403-1411
Systematic Reverse Genetic Screening of T-DNA Tagged Genes in Rice for Functional Genomic Analyses: MADS-box Genes as a Test Case.
TextPresso Search Search textpresso for MADS57 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology negative regulation of brassinosteroid biosynthetic process( GO:0010423 )
brassinosteroid mediated signaling( GO:0009742 )
response to ammonium ion( GO:0060359 )
response to gravity( GO:0009629 )
cellular response to phosphate starvation( GO:0016036 )
cellular response to nitrogen starvation( GO:0006995 )
sequence-specific DNA binding( GO:0043565 )
regulation of transcription, DNA-dependent( GO:0006355 )
transcription( GO:0006350 )
nucleus( GO:0005634 )
transcription factor activity( GO:0003700 )
defense response to virus( GO:0051607 )
root development( GO:0048364 )
response to nitrate( GO:0010167 )
nitrate transport( GO:0015706 )
Trait Ontology abiotic stress trait( TO:0000168 )
viral disease resistance( TO:0000148 )
gravity response trait( TO:0002693 )
seminal root length( TO:0000586 )
brassinosteroid content( TO:0002676 )
root length( TO:0000227 )
leaf angle( TO:0000206 )
internode length( TO:0000145 )
coleoptile length( TO:0001007 )
root development trait( TO:0000656 )
Plant Ontology root stele( PO:0020124 )
parenchyma cell( PO:0000074 )
xylem( PO:0005352 )
root( PO:0009005 )
4 root elongation stage( PO:0001031 )
root development stage( PO:0007520 )
Related Strains
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Phenotype images
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Last updated
Nov 15, 2021


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