Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol MADS56
Gene Symbol Synonym OsMADS56, FDRMADS8, RMADS214
CGSNL Gene Name MADS BOX GENE 56
Gene Name Synonym MADS box gene56, MADS-box transcription factor 56
Protein Name MADS-BOX TRANSCRIPTION FACTOR 56
Allele
Chromosome No. 10
Explanation A2Z9Q7(indica), P0C5B2(japonica). floral repressor.
Trait Class Reproductive organ - Heading date
Reproductive organ - panicle
Other
Expression
Sequence/Locus
cDNA Accession No. AK070135
MSU ID LOC_Os10g39130.1
LOC_Os10g39130.2
RAP ID Os10g0536100
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Shin W.J., Nam A.H., Kim J.Y., Kwak J.S., Song J.T., Seo H.S.
Plant Sci. 2022  320  111278
Intronic long noncoding RNA, RICE FLOWERING ASSOCIATED (RIFLA), regulates OsMADS56-mediated flowering in rice.
Ke S., Liu X.J., Luan X., Yang W., Zhu H., Liu G., Zhang G., Wang S.
Gene 2018  675  285-300
Genome-wide transcriptome profiling provides insights into panicle development of rice (Oryza sativa L.).
Jiang S., Sun S., Bai L., Ding G., Wang T., Xia T., Jiang H., Zhang X., Zhang F.
PLoS ONE 2017  12(7)  e0181037
Resequencing and variation identification of whole genome of the japonica rice variety "Longdao24" with high yield.
Liu X., Zhou S., Wang W., Ye Y., Zhao Y., Xu Q., Zhou C., Tan F., Cheng S., Zhou D.X.
Plant Cell 2015  27(5)  1428-44
Regulation of histone methylation and reprogramming of gene expression in the rice inflorescence meristem.
Nayar S., Kapoor M., Kapoor S.
J. Exp. Bot. 2014  65(18)  5339-50
Post-translational regulation of rice MADS29 function: homodimerization or binary interactions with other seed-expressed MADS proteins modulate its translocation into the nucleus.
Lu Z., Yu H., Xiong G., Wang J., Jiao Y., Liu G., Jing Y., Meng X., Hu X., Qian Q., Fu X., Wang Y., Li J.
Plant Cell 2013  25(10)  3743-59
Genome-Wide Binding Analysis of the Transcription Activator IDEAL PLANT ARCHITECTURE1 Reveals a Complex Network Regulating Rice Plant Architecture.
Wang J., Hu J., Qian Q., Xue H.W.
Mol Plant 2013  6(2)  514-27
LC2 and OsVIL2 promote rice flowering by photoperoid-induced epigenetic silencing of OsLF.
Choong-Hwan Ryu, Lee S., Lae-Hyeon Cho, Song Lim Kim, Yang-Seok Lee, Sang Chul Choi, Hee Joong Jeong, Yi J., Soon Ju Park, Chang-Deok Han, An G.
Plant Cell Environ. 2009  32(10)  1412-27
OsMADS50 and OsMADS56 function antagonistically in regulating long day (LD)-dependent flowering in rice.
Arora R., Agarwal P., Ray S., Ashok Kumar Singh, Vijay Pal Singh, Akhilesh K Tyagi, Kapoor S.
BMC Genomics 2007  8  242
MADS-box gene family in rice: genome-wide identification, organization and expression profiling during reproductive development and stress.
Lee,S., Kim,J., Son,J.S., Nam,J., Jeong,D.H., Lee,K., Jang,S., Yoo,J., Lee,J., Lee,D.Y., Kang,H.G. and An,G.
Plant Cell Physiol. 2003  44(12)  1403-1411
Systematic Reverse Genetic Screening of T-DNA Tagged Genes in Rice for Functional Genomic Analyses: MADS-box Genes as a Test Case.
TextPresso Search Search textpresso for MADS56 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology sequence-specific DNA binding( GO:0043565 )
transcription factor activity( GO:0003700 )
regulation of transcription, DNA-dependent( GO:0006355 )
nucleus( GO:0005634 )
transcription( GO:0006350 )
inflorescence development( GO:0010229 )
Trait Ontology flowering time( TO:0002616 )
inflorescence development trait( TO:0000621 )
Plant Ontology inflorescence development stage( PO:0001083 )
Related Strains
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Phenotype images
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Last updated
Nov 18, 2022

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