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Basic Information
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CGSNL Gene Symbol
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MADS50
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Gene Symbol Synonym
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OsMADS50, AGL20, SOC1, OsSOC1, RMADS208, OsSOC1/ OsMADS50/DTH3, DTH3, OsDTH3
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CGSNL Gene Name
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MADS BOX GENE 50
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Gene Name Synonym
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MADS box gene50, MADS-box transcription factor 50, Protein SUPPRESSOR OF CONSTANS OVEREXPRESSION 1-like, Protein AGAMOUS-like 20
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Protein Name
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MADS-BOX TRANSCRIPTION FACTOR 50
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Allele
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osmads50, osmads50-1, osmads50-2, mads50
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Chromosome No.
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3
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Explanation
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This gene is a flowering activator. Q9XJ60. GO:2000280: regulation of root development. GO:2000028: regulation of photoperiodism, flowering.
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Trait Class
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Other
Vegetative organ - Root
Reproductive organ - Heading date
Reproductive organ - panicle
Reproductive organ - Pollination, fertilization, fertility - Male sterility
Tolerance and resistance - Stress tolerance
Reproductive organ - Spikelet, flower, glume, awn
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK104921
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MSU ID
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LOC_Os03g03070.1
LOC_Os03g03100.1
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RAP ID
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Os03g0122600
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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Link to INSD Accession List
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Ferrero-Serrano Á., Chakravorty D., Kirven K.J., Assmann S.M.
Plant Commun 2024 5(4) 100813
Oryza CLIMtools: A genome-environment association resource reveals adaptive roles for heterotrimeric G proteins in the regulation of rice agronomic traits.
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Ferrero-Serrano Á., Chakravorty D., Kirven K.J., Assmann S.M.
bioRxiv 2023
Oryza CLIMtools: An Online Portal for Investigating Genome-Environment Associations in Rice.
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Tang H., Fan J., Wang R., Zhu J., Xiang X., Dong J., Zhou L., Wang L.
G3 (Bethesda) 2023 13(7)
Changes in the expression pattern of OsWUS negatively regulate plant stature and panicle development in rice.
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Dwivedi S.L., Reynolds M.P., Ortiz R.
iScience 2021 24(9) 102965
Mitigating tradeoffs in plant breeding.
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Osnato M., Matias-Hernandez L., Aguilar-Jaramillo AE., Kater M.M., Pelaz S.
Plant Physiol. 2020 183(4) 1663-1680
Genes of the <i>RAV</i> Family Control Heading Date and Carpel Development in Rice.
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Li N., Wang Y., Lu J., Liu C.
International Journal of Genomics 2019 2019 2146391
Genome-Wide Identification and Characterization of the ALOG Domain Genes in Rice.
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Jin J., Gui S., Li Q., Wang Y., Zhang H., Zhu Z., Chen H., Sun Y., Zou Y., Huang X., Ding Y.
J Integr Plant Biol 2019
The transcription factor GATA10 regulates fertility conversion of a two-line hybrid tms5 mutant rice via the modulation of UbL40 expression.
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Fang J., Zhang F., Wang H., Wang W., Zhao F., Li Z., Sun C., Chen F., Xu F., Chang S., Wu L., Bu Q., Wang P., Xie J., Chen F., Huang X., Zhang Y., Zhu X., Han B., Deng X., Chu C.
Proc. Natl. Acad. Sci. U.S.A. 2019 116(37) 18717-18722
<i>Ef-cd</i> locus shortens rice maturity duration without yield penalty.
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Shao Y., Zhou H.Z., Wu Y., Zhang H., Lin J., Jiang X., He Q., Zhu J., Li Y., Yu H., Mao C.
Plant Cell 2019 31(6) 1257-1275
OsSPL3, an SBP-Domain Protein, Regulates crown root Development in Rice.
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Ke S., Liu X.J., Luan X., Yang W., Zhu H., Liu G., Zhang G., Wang S.
Gene 2018 675 285-300
Genome-wide transcriptome profiling provides insights into panicle development of rice (Oryza sativa L.).
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Du Y., He W., Deng C., Chen X., Gou L., Zhu F., Guo W., Zhang J., Wang T.
PLoS ONE 2016 11(3) e0150458
Flowering-Related RING Protein 1 (FRRP1) Regulates flowering time and Yield Potential by Affecting histone H2B Monoubiquitination in Rice (Oryza Sativa).
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Jin J., Shi J., Liu B., Liu Y., Huang Y., Yu Y., Dong A.
Plant Physiol. 2015
MRG702, a reader protein of H3K4me3 and H3K36me3, is involved in brassinosteroid-regulated growth and flowering time control in rice.
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Naeem M.a c, Freed S.b, Quan Z.G.a
Int J Agric Biol 2013 15 631-639
Molecular genetic studies of heading date gene OsMADS50 by using single segment substitution lines in Oryza sativa
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Wang J., Hu J., Qian Q., Xue H.W.
Mol Plant 2013 6(2) 514-27
LC2 and OsVIL2 promote rice flowering by photoperoid-induced epigenetic silencing of OsLF.
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Sun C., Fang J., Zhao T., Xu B., Zhang F., Liu L., Tang J., Zhang G., Deng X., Chen F., Qian Q., Cao X., Chu C.
Plant Cell 2012 24(8) 3235-47
The histone methyltransferase SDG724 Mediates H3K36me2/3 Deposition at MADS50 and RFT1 and Promotes Flowering in Rice.
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Maas LF,McClung A,McCouch S
Theor. Appl. Genet. 2010 120(5) 895-908
Dissection of a QTL reveals an adaptive, interacting gene complex associated with transgressive variation for flowering time in rice.
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Komiya R., Yokoi S., Shimamoto K.
Development 2009 136(20) 3443-50
A gene network for long-day flowering activates RFT1 encoding a mobile flowering signal in rice.
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Choong-Hwan Ryu, Lee S., Lae-Hyeon Cho, Song Lim Kim, Yang-Seok Lee, Sang Chul Choi, Hee Joong Jeong, Yi J., Soon Ju Park, Chang-Deok Han, An G.
Plant Cell Environ. 2009 32(10) 1412-27
OsMADS50 and OsMADS56 function antagonistically in regulating long day (LD)-dependent flowering in rice.
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Park SJ,Kim SL,Lee S,Je BI,Piao HL,Park SH,Kim CM,Ryu CH,Park SH,Xuan YH,Colasanti J,An G,Han CD
Plant J. 2008 56 1018-29
Rice Indeterminate 1 (OsId1) is necessary for the expression of Ehd1 (Early heading date 1) regardless of photoperiod.
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Rao NN,Prasad K,Kumar PR,Vijayraghavan U
Proc. Natl. Acad. Sci. U.S.A. 2008 105 3646-51
Distinct regulatory role for RFL, the rice LFY homolog, in determining flowering time and plant architecture.
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Arora R., Agarwal P., Ray S., Ashok Kumar Singh, Vijay Pal Singh, Akhilesh K Tyagi, Kapoor S.
BMC Genomics 2007 8 242
MADS-box gene family in rice: genome-wide identification, organization and expression profiling during reproductive development and stress.
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Lee, S. J. Kim, J.J. Han, M.J. Han and G. An
Plant J. 2004 38 (5) 754-764
Functional analyses of the flowering time gene OsMADS50, the putative SUPPRESSOR OF OVEREXPRESSION OF CO 1/AGAMOUS-LIKE 20 (SOC1/AGL20) ortholog in rice.
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Tadege M, Sheldon CC, Helliwell CA, Upadhyaya NM, Dennis ES, Peacock WJ.
Plant Biotechnol J. 2003 1(5) 361-9
Reciprocal control of flowering time by OsSOC1 in transgenic Arabidopsis and by FLC in transgenic rice.
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Lee,S., Kim,J., Son,J.S., Nam,J., Jeong,D.H., Lee,K., Jang,S., Yoo,J., Lee,J., Lee,D.Y., Kang,H.G. and An,G.
Plant Cell Physiol. 2003 44(12) 1403-1411
Systematic Reverse Genetic Screening of T-DNA Tagged Genes in Rice for Functional Genomic Analyses: MADS-box Genes as a Test Case.
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Shinozuka, Y., S. Kojima, A. Shomura, H. Ichimura, M. Yano, K. Yamamoto and T. Sasaki
DNA Res. 1999 6 123-129
Isolation and characterization of rice MADS box gene homologues and their RFLP mapping.
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TextPresso Search
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Search textpresso for MADS50
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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photoperiodism, flowering( GO:0048573 )
response to temperature stimulus( GO:0009266 )
regulation of transcription, DNA-dependent( GO:0006355 )
flower development( GO:0009908 )
cell differentiation( GO:0030154 )
sequence-specific DNA binding( GO:0043565 )
DNA binding( GO:0003677 )
transcription factor activity( GO:0003700 )
nucleus( GO:0005634 )
transcription( GO:0006350 )
inflorescence development( GO:0010229 )
root development( GO:0048364 )
pollen wall assembly( GO:0010208 )
pollen development( GO:0009555 )
anther development( GO:0048653 )
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Trait Ontology
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inflorescence development trait( TO:0000621 )
root development trait( TO:0000656 )
crown root number( TO:0002685 )
male sterility( TO:0000437 )
temperature response trait( TO:0000432 )
days to heading( TO:0000137 )
flowering time( TO:0002616 )
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Plant Ontology
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inflorescence development stage( PO:0001083 )
root development stage( PO:0007520 )
anther development stage( PO:0001004 )
pollen development stage( PO:0001007 )
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Related Strains
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Phenotype images
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Last updated
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Jun 18, 2024
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