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Basic Information
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CGSNL 遺伝子シンボル
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MADS47
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遺伝子シンボルシノニム
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OsMADS47, OsMDP1, MDP, MDP1
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CGSNL 遺伝子名
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MADS BOX GENE 47
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遺伝子名シノニム
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MADS box gene47, MADS-domain-contaiing protein1, MADS-domain-containing protein 1, MADS-box transcription factor 47, MADS-DOMAIN-CONTAIING PROTEIN1, MADS domain protein 1
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タンパク質名
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MADS-BOX TRANSCRIPTION FACTOR 47
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対立遺伝子
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染色体番号
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3
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解説
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AY345221, AC125471, AJ536158. Q5K4R0. PO:0003003; primary root elongation zone. GRO:0007047; 02-seedling ; GRO:0007235; 1.3-coleoptile emergence stage. SHORT VEGETATIVE PHASE (SVP) subfamily. TO:0000816: inflorescence bract anatomy and morphology trait. a downstream gene of OsJMJ706. the candidate gene for qTGW3.1 (QTL for thousand-grain weight).
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形質クラス
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生殖器官 - 穂
生殖器官 - 小穂、花、頴、芒
その他
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発現
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Sequence/Locus
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cDNA Accession No.
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AK242211
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MSU ID
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LOC_Os03g08754.1
LOC_Os03g08754.2
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RAP ID
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Os03g0186600
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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Link to INSD Accession List
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マップ
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位置情報(cM)
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リンケージマップ
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Classical linkage map
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文献
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Niu Y., Chen T., Wang C., Chen K., Shen C., Chen H., Zhu S., Wu Z., Zheng T., Zhang F., Xu J.
BMC Genomics 2021 22(1) 602
Identification and allele mining of new candidate genes underlying rice grain weight and grain shape by genome-wide association study.
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Wang A., Hou Q., Si L., Huang X., Luo J., Lu D., Zhu J., Shangguan Y., Miao J., Xie Y., Wang Y., Zhao Q., Feng Q., Zhou C., Li Y., Fan D., Lu Y., Tian Q., Wang Z., Han B.
Plant Physiol. 2019 180(4) 2077-2090
The PLATZ Transcription Factor GL6 Affects Grain Length and Number in Rice.
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Li Y., Li X., Fu D., Wu C.
BMC Plant Biol. 2018 18(1) 348
Panicle Morphology Mutant 1 (PMM1) determines the inflorescence architecture of rice by controlling brassinosteroid biosynthesis.
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Qin R., Zeng D., Yang C., Akhter D., Alamin M., Jin X., Shi C.
Genes (Basel) 2018 9(6)
<i>LTBSG1</i>, a New Allele of <i>BRD2</i>, Regulates Panicle and Grain Development in Rice by Brassinosteroid Biosynthetic Pathway.
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Ke S., Liu X.J., Luan X., Yang W., Zhu H., Liu G., Zhang G., Wang S.
Gene 2018 675 285-300
Genome-wide transcriptome profiling provides insights into panicle development of rice (Oryza sativa L.).
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Jiang W., Zhou S., Zhang Q., Song H., Zhou D.X., Zhao Y.
J. Exp. Bot. 2017 68(11) 2787-2798
Transcriptional regulatory network of WOX11 is involved in the control of crown root development, cytokinin signals, and redox in rice.
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Liu S., Hua L., Dong S., Chen H., Zhu X., Jiang J., Zhang F., Li Y., Fang X., Chen F.
Plant J. 2015
OsMAPK6, a mitogen-activated protein kinase, influences rice grain size and biomass production.
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Liu H., Guo S., Xu Y., Li C., Zhang Z., Zhang D., Xu S., Zhang C., Chong K.
Plant Physiol. 2014 165(1) 160-74
OsmiR396d-regulated OsGRFs Function in Floral Organogenesis in Rice through Binding to their Targets OsJMJ706 and OsCR4.
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Yoshida A., Sasao M., Yasuno N., Takagi K., Daimon Y., Chen R., Yamazaki R., Tokunaga H., Kitaguchi Y., Sato Y., Nagamura Y., Ushijima T., Kumamaru T., Iida S., Maekawa M., Kyozuka J.
Proc. Natl. Acad. Sci. U.S.A. 2013 110(2) 767-72
TAWAWA1, a regulator of rice inflorescence architecture, functions through the suppression of meristem phase transition.
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Jiang,Y., Bao,L., Jeong,S.Y., Kim,S.K., Xu,C., Li,X. and Zhang,Q.
Plant J. 2011
XIAO is involved in the control of organ size by contributing to the regulation of signaling and homeostasis of brassinosteroids and cell cycling in rice
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Lee S., Sang Chul Choi, An G.
Plant J. 2008 54(1) 93-105
Rice SVP-group MADS-box proteins, OsMADS22 and OsMADS55, are negative regulators of brassinosteroid responses.
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Sun Q,Zhou DX
Proc. Natl. Acad. Sci. U.S.A. 2008 105 13679-84
Rice jmjC domain-containing gene JMJ706 encodes H3K9 demethylase required for floral organ development.
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Arora R., Agarwal P., Ray S., Ashok Kumar Singh, Vijay Pal Singh, Akhilesh K Tyagi, Kapoor S.
BMC Genomics 2007 8 242
MADS-box gene family in rice: genome-wide identification, organization and expression profiling during reproductive development and stress.
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Duan,K., Li,L., Hu,P., Xu,S.P., Xu,Z.H. and Xue,H.W.
Plant J. 2006 47(4) 519-531
A brassinolide-suppressed rice MADS-box transcription factor, OsMDP1, has a negative regulatory role in BR signaling.
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Lee,S., Kim,J., Son,J.S., Nam,J., Jeong,D.H., Lee,K., Jang,S., Yoo,J., Lee,J., Lee,D.Y., Kang,H.G. and An,G.
Plant Cell Physiol. 2003 44(12) 1403-1411
Systematic Reverse Genetic Screening of T-DNA Tagged Genes in Rice for Functional Genomic Analyses: MADS-box Genes as a Test Case.
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TextPresso Search
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Search textpresso for MADS47
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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GR:0080019
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オントロジー
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Gene Ontology
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brassinosteroid mediated signaling( GO:0009742 )
sequence-specific DNA binding( GO:0043565 )
regulation of transcription, DNA-dependent( GO:0006355 )
transcription( GO:0006350 )
nucleus( GO:0005634 )
DNA binding( GO:0003677 )
transcription factor activity( GO:0003700 )
inflorescence development( GO:0010229 )
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Trait Ontology
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plant growth hormone sensitivity( TO:0000401 )
leaf angle( TO:0000206 )
root length( TO:0000227 )
floral organ development trait( TO:0006022 )
sterile lemma length( TO:0000240 )
inflorescence development trait( TO:0000621 )
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Plant Ontology
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obsolete primary root elongation zone( PO:0003003 )
leaf collar( PO:0006012 )
root( PO:0009005 )
seed( PO:0009010 )
vascular leaf( PO:0009025 )
stem( PO:0009047 )
inflorescence( PO:0009049 )
coleoptile( PO:0020033 )
stem internode( PO:0020142 )
inflorescence development stage( PO:0001083 )
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関連系統
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形質画像
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更新日
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2022-03-22 13:29:46.231
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更新情報
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