Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol CFO1
Gene Symbol Synonym OsMADS32, MADS32, OsCFO1, CFO1/OsMADS32, TRI1, OsTRI1 , OsMADS32/CFO, CFO, OsCFO
Gene Name Synonym MADS box gene32, MADS-box transcription factor 32, triangular hull 1
Allele cfo1, tri1, cfo
Chromosome No. 1
Explanation Q8S151. HQ711850.
Trait Class Reproductive organ - panicle
Reproductive organ - Spikelet, flower, glume, awn
cDNA Accession No. AY177699
MSU ID LOC_Os01g52680.1
RAP ID Os01g0726400
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Link map Classical linkage map
Hu J., Huang L., Chen G., Liu H., Zhang Y., Zhang R., Zhang S., Liu J., Hu Q., Hu F., Wang W., Ding Y.
Rice (N Y) 2021  14(1)  90
The Elite Alleles of OsSPL4 Regulate grain size and Increase Grain Yield in Rice.
Kannan P., Chongloi G.L., Majhi B.B., Basu D., Veluthambi K., Vijayraghavan U.
Planta 2021  253(2)  39
Characterization of a new rice OsMADS1 null mutant generated by homologous recombination-mediated gene targeting.
Ke S., Liu X.J., Luan X., Yang W., Zhu H., Liu G., Zhang G., Wang S.
Gene 2018  675  285-300
Genome-wide transcriptome profiling provides insights into panicle development of rice (Oryza sativa L.).
Khanday I., Das S., Chongloi G.L., Bansal M., Grossniklaus U., Vijayraghavan U.
Plant Physiol. 2016  172(1)  372-88
Genome-Wide Targets Regulated by the OsMADS1 Transcription Factor Reveals Its DNA Recognition Properties.
Feng G.N.a b, Zhang C.Q.a, Tang M.Y.a, Zhang G.Y.a, Xu C.W.a, Gu M.H.a, Liu Q.Q.a
Chinese Science Bulletin 2013  58  2984-2991
Genetic analysis and gene cloning of a triangular hull 1 (tri1) mutant in rice (Oryza sativa L.)
Sang,X., Li,Y., Luo,Z., Ren,D., Fang,L., Wang,N., Zhao,F., Ling,Y., Yang,Z., Liu,Y. and He,G.
Plant Physiol. 2012  160(2)  788-807
CHIMERIC FLORAL ORGANS 1, Encoding a Monocot-specific MADS-box Protein, Regulates Floral Organ Identity in Rice
Arora R., Agarwal P., Ray S., Ashok Kumar Singh, Vijay Pal Singh, Akhilesh K Tyagi, Kapoor S.
BMC Genomics 2007  8  242
MADS-box gene family in rice: genome-wide identification, organization and expression profiling during reproductive development and stress.
Lee,S., Kim,J., Son,J.S., Nam,J., Jeong,D.H., Lee,K., Jang,S., Yoo,J., Lee,J., Lee,D.Y., Kang,H.G. and An,G.
Plant Cell Physiol. 2003  44(12)  1403-1411
Systematic Reverse Genetic Screening of T-DNA Tagged Genes in Rice for Functional Genomic Analyses: MADS-box Genes as a Test Case.
TextPresso Search Search textpresso for CFO1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Gene Ontology transcription factor activity( GO:0003700 )
nucleus( GO:0005634 )
transcription( GO:0006350 )
sequence-specific DNA binding( GO:0043565 )
regulation of transcription, DNA-dependent( GO:0006355 )
specification of floral organ identity( GO:0010093 )
inflorescence development( GO:0010229 )
Trait Ontology fruit structure trait( TO:0002629 )
lemma and palea anatomy and morphology trait( TO:0000079 )
carpel anatomy and morphology trait( TO:0006012 )
inflorescence development trait( TO:0000621 )
Plant Ontology inflorescence development stage( PO:0001083 )
Related Strains
Phenotype images
Last updated
May 24, 2022