|
Basic Information
|
|
CGSNL Gene Symbol
|
MADS25
|
|
Gene Symbol Synonym
|
OsMADS25
|
|
CGSNL Gene Name
|
MADS BOX GENE 25
|
|
Gene Name Synonym
|
MADS box gene25, MADS-box transcription factor 25
|
|
Protein Name
|
MADS-BOX TRANSCRIPTION FACTOR 25
|
|
Allele
|
|
|
Chromosome No.
|
4
|
|
Explanation
|
Q84NC5. GO:0072593: reactive oxygen species metabolic process. GO:1902457: negative regulation of stomatal opening. GO:1900458: negative regulation of brassinosteroid mediated signaling pathway. GO:2000280: regulation of root development.
|
|
Trait Class
|
Vegetative organ - Root
Tolerance and resistance - Stress tolerance
Other
|
|
Expression
|
|
|
Sequence/Locus
|
|
cDNA Accession No.
|
AK102927
|
|
MSU ID
|
LOC_Os04g23910.1
|
|
RAP ID
|
Os04g0304400
|
|
Links
|
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
|
INSD Accession List
(Test version)
|
Link to INSD Accession List
|
|
Map
|
|
Locate(cM)
|
|
|
Link map
|
Classical linkage map
|
|
References
|
|
Jiao X., Wang H., Yan J., Kong X., Liu Y., Chu J., Chen X., Fang R., Yan Y.
Plant Physiol. 2020 182(3) 1454-1466
Promotion of BR Biosynthesis by miR444 Is Required for Ammonium-Triggered Inhibition of Root Growth.
|
|
Chen R., Xu N., Yu B., Wu Q., Li X., Wang G., Huang J.
Plant Sci. 2020 298 110575
The WUSCHEL-related homeobox transcription factor OsWOX4 controls the primary root elongation by activating OsAUX1 in rice.
|
|
Wei J., Zheng Y., Feng H., Qu H., Fan X., Yamaji N., Ma J.F., Xu G.
J. Exp. Bot. 2018 69(5) 1095-1107
OsNRT2.4 encodes a dual-affinity nitrate transporter and functions in nitrate-regulated root growth and nitrate distribution in rice.
|
|
Xu N., Chu Y., Chen H., Li X., Wu Q., Jin L., Wang G., Huang J.
PLoS Genet. 2018 14(10) e1007662
Rice transcription factor OsMADS25 modulates root growth and confers salinity tolerance via the ABA-mediated regulatory pathway and ROS scavenging.
|
|
Nayar S., Kapoor M., Kapoor S.
J. Exp. Bot. 2014 65(18) 5339-50
Post-translational regulation of rice MADS29 function: homodimerization or binary interactions with other seed-expressed MADS proteins modulate its translocation into the nucleus.
|
|
Puig J., Meynard D., Khong G.N., Pauluzzi G., Guiderdoni E., Gantet P.
Gene Expr. Patterns 2013 13(5-6) 160-170
Analysis of the expression of the AGL17-like clade of MADS-box transcription factors in rice.
|
|
Arora R., Agarwal P., Ray S., Ashok Kumar Singh, Vijay Pal Singh, Akhilesh K Tyagi, Kapoor S.
BMC Genomics 2007 8 242
MADS-box gene family in rice: genome-wide identification, organization and expression profiling during reproductive development and stress.
|
|
Lee,S., Kim,J., Son,J.S., Nam,J., Jeong,D.H., Lee,K., Jang,S., Yoo,J., Lee,J., Lee,D.Y., Kang,H.G. and An,G.
Plant Cell Physiol. 2003 44(12) 1403-1411
Systematic Reverse Genetic Screening of T-DNA Tagged Genes in Rice for Functional Genomic Analyses: MADS-box Genes as a Test Case.
|
|
TextPresso Search
|
Search textpresso for MADS25
( Recent references may be retrievable, but without any warranty )
|
|
DB Reference
|
|
Gramene ID
|
-
|
|
Ontologies
|
|
Gene Ontology
|
root development( GO:0048364 )
brassinosteroid mediated signaling( GO:0009742 )
negative regulation of brassinosteroid biosynthetic process( GO:0010423 )
response to ammonium ion( GO:0060359 )
nucleus( GO:0005634 )
transcription factor activity( GO:0003700 )
regulation of transcription, DNA-dependent( GO:0006355 )
transcription( GO:0006350 )
sequence-specific DNA binding( GO:0043565 )
response to salt stress( GO:0009651 )
abscisic acid mediated signaling( GO:0009738 )
response to hydrogen peroxide( GO:0042542 )
response to oxidative stress( GO:0006979 )
response to abscisic acid stimulus( GO:0009737 )
positive regulation of auxin mediated signaling pathway( GO:0010929 )
positive regulation of unidimensional cell growth( GO:0051512 )
|
|
Trait Ontology
|
salt tolerance( TO:0006001 )
abscisic acid sensitivity( TO:0000615 )
hydrogen peroxide content( TO:0000605 )
root length( TO:0000227 )
lateral root number( TO:0001013 )
oxidative stress( TO:0002657 )
proline content( TO:0006002 )
auxin sensitivity( TO:0000163 )
root development trait( TO:0000656 )
brassinosteroid content( TO:0002676 )
|
|
Plant Ontology
|
root( PO:0009005 )
root development stage( PO:0007520 )
|
|
Related Strains
|
|
-
|
|
Phenotype images
|
|
-
|
|
Last updated
|
|
Nov 15, 2021
|
Update info.
Click here for feedback