Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol MADS21
Gene Symbol Synonym OsMADS21, RMADS207
CGSNL Gene Name MADS BOX GENE 21
Gene Name Synonym MADS box gene21, MADS-box transcription factor 21
Protein Name TRANSCRIPTION FACTOR MADS21
Allele osmads21
Chromosome No. 1
Explanation AY551913. Q8RU31.
Trait Class Reproductive organ - panicle
Other
Expression
Sequence/Locus
cDNA Accession No. AK070958
MSU ID LOC_Os01g66290.1
LOC_Os01g66290.2
RAP ID Os01g0886200
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Ke S., Liu X.J., Luan X., Yang W., Zhu H., Liu G., Zhang G., Wang S.
Gene 2018  675  285-300
Genome-wide transcriptome profiling provides insights into panicle development of rice (Oryza sativa L.).
Dreni L., Pilatone A., Yun D., Erreni S., Pajoro A., Caporali E., Zhang D., Kater M.M.
Plant Cell 2011  23(8)  2850-63
Functional analysis of all AGAMOUS subfamily members in rice reveals their roles in reproductive organ identity determination and meristem determinacy.
Arora R., Agarwal P., Ray S., Ashok Kumar Singh, Vijay Pal Singh, Akhilesh K Tyagi, Kapoor S.
BMC Genomics 2007  8  242
MADS-box gene family in rice: genome-wide identification, organization and expression profiling during reproductive development and stress.
Dreni L., Jacchia S., Fornara F., Fornari M., Ouwerkerk P.B., An G., Colombo L., Kater M.M.
Plant J. 2007  52(4)  690-9
The D-lineage MADS-box gene OsMADS13 controls ovule identity in rice.
Lee,S., Kim,J., Son,J.S., Nam,J., Jeong,D.H., Lee,K., Jang,S., Yoo,J., Lee,J., Lee,D.Y., Kang,H.G. and An,G.
Plant Cell Physiol. 2003  44(12)  1403-1411
Systematic Reverse Genetic Screening of T-DNA Tagged Genes in Rice for Functional Genomic Analyses: MADS-box Genes as a Test Case.
DB Reference
Gramene ID -
Ontologies
Gene Ontology sequence-specific DNA binding( GO:0043565 )
transcription factor activity( GO:0003700 )
nucleus( GO:0005634 )
transcription( GO:0006350 )
regulation of transcription, DNA-dependent( GO:0006355 )
inflorescence development( GO:0010229 )
Trait Ontology inflorescence development trait( TO:0000621 )
Plant Ontology inflorescence development stage( PO:0001083 )
Related Strains
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Phenotype images
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Last updated
Sep 21, 2020

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