Gene - Detail

Detail of Gene

Click here for feedback

Basic Information
CGSNL Gene Symbol MADS18
Gene Symbol Synonym OsMADS18, MADS2, OsMADS2, MADS28, OsMADS28, FDRMADS7, OsMADS18/28
CGSNL Gene Name MADS BOX GENE 18
Gene Name Synonym MADS box gene18, MADS-box transcription factor 18, MADS-box protein 2, MADS-box protein 28
Protein Name MADS-BOX TRANSCRIPTION FACTOR 18
Allele osmads18, osmads18-cas9-1, osmads18-cas9-7
Chromosome No. 7
Explanation A2YNI2(indica). Q0D4T4(japonica). GRO:0007048; 04-stem elongation stage ; GRO:0007165; leaf stage P5 ; GRO:0007059; 2.01-first leaf through coleoptile ; GRO:0007147; 4.1-panicle initiation stage. an ortholog of Arabidopsis AP1. PO:0030123: panicle inflorescence.
Trait Class Reproductive organ - Spikelet, flower, glume, awn
Other
Tolerance and resistance - Stress tolerance
Reproductive organ - Heading date
Vegetative organ - Culm
Vegetative organ - Root
Reproductive organ - panicle
Seed - Physiological traits - Dormancy
Seed - Physiological traits - Storage substances
Expression
Sequence/Locus
cDNA Accession No. AK064704
MSU ID LOC_Os07g41370.1
LOC_Os07g41370.2
RAP ID Os07g0605200
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Liu C., Li N., Lu Z., Sun Q., Pang X., Xiang X., Deng C., Xiong Z., Shu K., Yang F., Hu Z.
Front Plant Sci 2022  13  839457
CG and CHG Methylation Contribute to the Transcriptional Control of OsPRR37-output Genes in Rice.
Qu L., Chu Y.J., Lin W.H., Xue H.W.
PLoS Genet. 2021  17(12)  e1009905
A secretory Phospholipase D hydrolyzes phosphatidylcholine to suppress rice heading time.
Osnato M., Matias-Hernandez L., Aguilar-Jaramillo AE., Kater M.M., Pelaz S.
Plant Physiol. 2020  183(4)  1663-1680
Genes of the <i>RAV</i> Family Control Heading Date and Carpel Development in Rice.
Yang C., Liu X., Li D., Zhu X., Wei Z., Feng Z., Zhang L., He J., Mou C., Jiang L., Wan J.
Plant Sci. 2019  288  110239
OsLUGL is involved in the regulating auxin level and OsARFs expression in rice (Oryza sativa L.).
Yin X., Liu X., Xu B., Lu P., Dong T., Yang D., Ye T., Feng Y.Q., Wu Y.
J. Exp. Bot. 2019  70(15)  3895-3909
OsMADS18, a membrane-bound MADS-box transcription factor, modulates plant architecture and the abscisic acid response in rice.
Liu X., Zhou S., Wang W., Ye Y., Zhao Y., Xu Q., Zhou C., Tan F., Cheng S., Zhou D.X.
Plant Cell 2015  27(5)  1428-44
Regulation of histone methylation and reprogramming of gene expression in the rice inflorescence meristem.
Nayar S., Kapoor M., Kapoor S.
J. Exp. Bot. 2014  65(18)  5339-50
Post-translational regulation of rice MADS29 function: homodimerization or binary interactions with other seed-expressed MADS proteins modulate its translocation into the nucleus.
Kobayashi K., Yasuno N., Sato Y., Yoda M., Yamazaki R., Kimizu M., Yoshida H., Nagamura Y., Kyozuka J.
Plant Cell 2012  24(5)  1848-59
inflorescence meristem Identity in Rice Is Specified by Overlapping Functions of Three AP1/FUL-Like MADS Box Genes and PAP2, a SEPALLATA MADS Box Gene.
Arora R., Agarwal P., Ray S., Ashok Kumar Singh, Vijay Pal Singh, Akhilesh K Tyagi, Kapoor S.
BMC Genomics 2007  8  242
MADS-box gene family in rice: genome-wide identification, organization and expression profiling during reproductive development and stress.
Lee,S., Kim,J., Son,J.S., Nam,J., Jeong,D.H., Lee,K., Jang,S., Yoo,J., Lee,J., Lee,D.Y., Kang,H.G. and An,G.
Plant Cell Physiol. 2003  44(12)  1403-1411
Systematic Reverse Genetic Screening of T-DNA Tagged Genes in Rice for Functional Genomic Analyses: MADS-box Genes as a Test Case.
Moon,Y.H., Kang,H.G., Jung,J.Y., Jeon,J.S., Sung,S.K. and An,G.
Plant Physiol. 1999  120(4)  1193-1204
Determination of the motif responsible for interaction between the rice APETALA1/AGAMOUS-LIKE9 family proteins using a yeast two-hybrid system.
TextPresso Search Search textpresso for MADS18 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0080025
Ontologies
Gene Ontology circadian rhythm( GO:0007623 )
vegetative to reproductive phase transition( GO:0010228 )
transcription factor activity( GO:0003700 )
nucleus( GO:0005634 )
transcription( GO:0006350 )
regulation of transcription, DNA-dependent( GO:0006355 )
sequence-specific DNA binding( GO:0043565 )
protein binding( GO:0005515 )
flower development( GO:0009908 )
specification of floral organ identity( GO:0010093 )
cell differentiation( GO:0030154 )
regulation of transcription( GO:0045449 )
adventitious root development( GO:0048830 )
regulation of seed germination( GO:0010029 )
response to abscisic acid stimulus( GO:0009737 )
plasma membrane( GO:0005886 )
Trait Ontology internode length( TO:0000145 )
plant height( TO:0000207 )
abscisic acid sensitivity( TO:0000615 )
tiller number( TO:0000346 )
panicle size( TO:0006032 )
spikelet fertility( TO:0000180 )
chalky endosperm( TO:0000266 )
germination rate( TO:0000430 )
flowering time( TO:0002616 )
stem length( TO:0000576 )
flower development trait( TO:0000622 )
Plant Ontology shoot-borne root( PO:0000042 )
leaf aerenchyma( PO:0006215 )
spikelet floret( PO:0009082 )
flower meristem( PO:0000229 )
fruit( PO:0009001 )
root( PO:0009005 )
vascular leaf( PO:0009025 )
stem( PO:0009047 )
inflorescence( PO:0009049 )
leaf sheath( PO:0020104 )
0 seed germination stage( PO:0007057 )
flower development stage( PO:0007615 )
leaf( PO:0025034 )
shoot system( PO:0009006 )
Related Strains
-
Phenotype images
-
Last updated
Jun 21, 2022


/rice/oryzabase