Gene - Detail

Detail of Gene

Click here for feedback

Basic Information
CGSNL Gene Symbol MFO1
Gene Symbol Synonym OsMADS6, MADS6, OsMFO1
Gene Name Synonym MADS box gene6, AGL6-like MADS Box gene, mosaic floral organs 1
Allele mfo1-1, mfo1-2, osmads6, mfo1, Osmads6-1, Osmads6-2, Osmads6-5, mads6-1, mads6-5
Chromosome No. 2
Explanation Q6EU39. U78782. GQ496635, GQ496636, GQ496637 (wild rice species). MFO1 regulates floral organ identities and the establishment and determinacy of floral meristem.
Trait Class Reproductive organ - panicle
Tolerance and resistance - Stress tolerance
Reproductive organ - Spikelet, flower, glume, awn
cDNA Accession No. AK069103
MSU ID LOC_Os02g45770.1
RAP ID Os02g0682200
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Link map Classical linkage map
Liu E., Zhu S., Du M., Lyu H., Zeng S., Liu Q., Wu G., Jiang J., Dang X., Dong Z., Hong D.
Gene 2023  883  147635
LAX1, functioning with MADS-box genes, determines normal palea development in rice.
Mao X., Zheng X., Chen W., Li C.
Int J Mol Sci 2023  24(16) 
Characterization and Gene Mapping of an Open-Glume <i>Oryza sativa</i> L. Mutant.
Liu C., Ma T., Yuan D., Zhou Y., Long Y., Li Z., Dong Z., Duan M., Yu D., Jing Y., Bai X., Wang Y., Hou Q., Liu S., Zhang J.S., Chen S.Y., Li D., Liu X., Li Z., Wang W., Li J., Wei X., Ma B., Wan X.
Plant Biotechnol. J. 2022  20(8)  1470-1486
The OsEIL1-OsERF115-target gene regulatory module controls grain size and weight in rice.
Wu Q., Liu Y., Huang J.
Int J Mol Sci 2022  23(4) 
CRISPR-Cas9 Mediated Mutation in <i>OsPUB43</i> Improves Grain Length and Weight in Rice by Promoting Cell Proliferation in Spikelet Hull.
Li M., Fu D., Xu T., Wu C.
Int J Mol Sci 2021  22(15) 
<i>VPB1</i> Encoding BELL-like homeodomain Protein Is Involved in Rice Panicle Architecture.
Zhuang H., Hong-Lei Wang, Zhang T., Xiao-Qin Zeng, Chen H., Zhong-Wei Wang, Zhang J., Zheng H., Tang J., Ying-Hua Ling, Zheng-Lin Yang, Guang-Hua He, Yun-Feng Li
Plant Cell 2020  32(2)  392-413
<i>NONSTOP GLUMES1</i> Encodes a C2H2 Zinc Finger Protein That Regulates Spikelet Development in Rice.
Phule A.S., Barbadikar K.M., Maganti S.M., Seguttuvel P., Subrahmanyam D., Babu MBBP., Kumar P.A.
Sci Rep 2019  9(1)  5235
RNA-seq reveals the involvement of key genes for aerobic adaptation in rice.
Tao J., Liang W., An G., Zhang D.
Plant Physiol. 2018  177(2)  713-727
<i>OsMADS6</i> Controls Flower Development by Activating Rice <i>FACTOR OF DNA METHYLATION LIKE1</i>.
Ke S., Liu X.J., Luan X., Yang W., Zhu H., Liu G., Zhang G., Wang S.
Gene 2018  675  285-300
Genome-wide transcriptome profiling provides insights into panicle development of rice (Oryza sativa L.).
Wang L., Yuan J., Ma Y., Jiao W., Ye W., Yang D.L., Yi C., Chen Z.J.
Mol Plant 2018  11(2)  300-314
Rice Interploidy Crosses Disrupt Epigenetic Regulation, Gene Expression, and Seed Development.
Bakshi A., Moin M., Datla R., Kirti P.B.
Plant Signal Behav 2017    0
Expression Profiling of Development Related Genes in Rice Plants Ectopically Expressing AtTOR.
Zhang T., Li Y., Ma L., Sang X., Ling Y., Wang Y., Yu P., Zhuang H., Huang J., Wang N., Zhao F., Zhang C., Yang Z., Fang L., He G.
Proc. Natl. Acad. Sci. U.S.A. 2017   
LATERAL FLORET 1 induced the three-florets spikelet in rice.
Bai X., Huang Y., Mao D., Wen M., Zhang L., Xing Y.
Sci Rep 2016  6  19022
Regulatory role of FZP in the determination of panicle branching and spikelet formation in rice.
Zhang B., Wu S., Zhang Y., Xu T., Guo F., Tang H., Li X., Wang P., Qian W., Xue Y.
PLoS Genet. 2016  12(7)  e1006152
A High Temperature-Dependent Mitochondrial Lipase EXTRA GLUME1 Promotes Floral Phenotypic Robustness against Temperature Fluctuation in Rice (Oryza sativa L.).
Marathi B., Jena K.K.
Euphytica 2014  201  1-14
Floral traits to enhance outcrossing for higher hybrid seed production in rice: present status and future prospects
Zhang J., Tang W., Huang Y., Niu X., Zhao Y., Han Y., Liu Y.
J. Exp. Bot. 2014   
Down-regulation of a LBD-like gene, OsIG1, leads to occurrence of unusual double ovules and developmental abnormalities of various floral organs and megagametophyte in rice.
Nayar S., Kapoor M., Kapoor S.
J. Exp. Bot. 2014  65(18)  5339-50
Post-translational regulation of rice MADS29 function: homodimerization or binary interactions with other seed-expressed MADS proteins modulate its translocation into the nucleus.
Yan D., Zhou Y., Ye S., Zeng L., Zhang X., He Z.
Sci China Life Sci 2013  56(3)  275-83
Beak-shaped grain 1/TRIANGULAR HULL 1, a DUF640 gene, is associated with grain shape, size and weight in rice.
Duan Y., Xing Z., Diao Z., Xu W., Li S., Du X., Wu G., Wang C., Lan T., Meng Z., Liu H., Wang F., Wu W., Xue Y.
Plant Mol. Biol. 2012  80(4-5)  429-42
Characterization of OsMADS6-5, a null allele, reveals that OsMADS6 is a critical regulator for early flower development in rice (Oryza sativa L.).
Pu C.X., Ma Y., Wang J., Zhang Y.C., Jiao X.W., Hu Y.H., Wang L.L., Zhu Z.G., Sun D., Sun Y.
Plant J. 2012  70(6)  940-53
Crinkly4 receptor-like kinase is required to maintain the interlocking of the palea and lemma, and fertility in rice, by promoting epidermal cell differentiation.
Li H., Liang W., Hu Y., Zhu L., Yin C., Xu J., Dreni L., Kater M.M., Zhang D.
Plant Cell 2011  23(7)  2536-52
Rice MADS6 interacts with the floral homeotic genes SUPERWOMAN1, MADS3, MADS58, MADS13, and DROOPING LEAF in specifying floral organ identities and meristem fate.
Yadav S.R., Khanday I., Majhi B.B., Veluthambi K., Vijayraghavan U.
Plant Cell Physiol. 2011  52(12)  2123-35
Auxin-Responsive OsMGH3, a Common Downstream Target of OsMADS1 and OsMADS6, Controls Rice Floret Fertility.
Zhang J,Nallamilli BR,Mujahid H,Peng Z
Plant J. 2010  64(4)  604-17
OsMADS6 plays an essential role in endosperm nutrient accumulation and is subject to epigenetic regulation in rice (Oryza sativa).
Ohmori S,Kimizu M,Sugita M,Miyao A,Hirochika H,Uchida E,Nagato Y,Yoshida H
Plant Cell 2009  21(10)  3008-25
MOSAIC FLORAL ORGANS1, an AGL6-like MADS box gene, regulates floral organ identity and meristem fate in rice.
Reinheimer R,Kellogg EA
Plant Cell 2009  21(9)  2591-605
Evolution of AGL6-like MADS box genes in grasses (Poaceae): ovule expression is ancient and palea expression is new.
Arora R., Agarwal P., Ray S., Ashok Kumar Singh, Vijay Pal Singh, Akhilesh K Tyagi, Kapoor S.
BMC Genomics 2007  8  242
MADS-box gene family in rice: genome-wide identification, organization and expression profiling during reproductive development and stress.
Lee,S., Kim,J., Son,J.S., Nam,J., Jeong,D.H., Lee,K., Jang,S., Yoo,J., Lee,J., Lee,D.Y., Kang,H.G. and An,G.
Plant Cell Physiol. 2003  44(12)  1403-1411
Systematic Reverse Genetic Screening of T-DNA Tagged Genes in Rice for Functional Genomic Analyses: MADS-box Genes as a Test Case.
Moon,Y.H., Kang,H.G., Jung,J.Y., Jeon,J.S., Sung,S.K. and An,G.
Plant Physiol. 1999  120(4)  1193-1204
Determination of the motif responsible for interaction between the rice APETALA1/AGAMOUS-LIKE9 family proteins using a yeast two-hybrid system.
TextPresso Search Search textpresso for MFO1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Gene Ontology floral organ development( GO:0048437 )
transcription factor activity( GO:0003700 )
regulation of transcription, DNA-dependent( GO:0006355 )
flower development( GO:0009908 )
cell differentiation( GO:0030154 )
sequence-specific DNA binding( GO:0043565 )
protein binding( GO:0005515 )
nucleus( GO:0005634 )
transcription( GO:0006350 )
specification of floral organ identity( GO:0010093 )
inflorescence development( GO:0010229 )
regulation of flower development( GO:0009909 )
Trait Ontology floral organ development trait( TO:0006022 )
inflorescence development trait( TO:0000621 )
Plant Ontology floral organ primordium( PO:0025477 )
plant ovule( PO:0020003 )
flower development stage( PO:0007615 )
inflorescence development stage( PO:0001083 )
palea development stage( PO:0001048 )
Related Strains
Phenotype images
Last updated
Dec 27, 2023