Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol MADS2
Gene Symbol Synonym OsMADS2, RMADS219, NMADS1, PI2, nmads1, DLN33, OsDLN33
Gene Name Synonym MADS box gene2, MADS-box transcription factor 2, GLOBOSA(GLO)-like MADS-box gene-2, DLN repressor 33, DLN motif protein 33
Chromosome No. 1
Explanation AF095645. JF312028, JF312030. Q40702. a rice PISTILLATA ortholog. PO:0009046; flower. PISTILLATA-like MADS box protein.
Trait Class Reproductive organ - Pollination, fertilization, fertility - Male sterility
Reproductive organ - Spikelet, flower, glume, awn
Tolerance and resistance - Stress tolerance
Expression spikelet - Sp5 - Formation of lodicule primordia
spikelet - Sp6 - Formation of stamen primordia
cDNA Accession No. AK070894
MSU ID LOC_Os01g66030.1
RAP ID Os01g0883100
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Link map Classical linkage map
Mehra P., Pandey B.K., Verma L., Prusty A., Singh A.P., Sharma S., Malik N., Bennett M.J., Parida S.K., Giri J., Tyagi A.K.
Plant Direct 2022  6(5)  e401
<i>OsJAZ11</i> regulates spikelet and seed development in rice.
Uji Y., Kashihara K., Kiyama H., Mochizuki S., Akimitsu K., Gomi K.
Int J Mol Sci 2019  20(12) 
Jasmonic Acid-Induced VQ-Motif-Containing Protein OsVQ13 Influences the OsWRKY45 Signaling Pathway and grain size by Associating with OsMPK6 in Rice.
Duan Y., Chen Y., Li W., Pan M., Qu X., Shi X., Cai Z., Liu H., Zhao F., Kong L., Ye Y., Wang F., Xue Y., Wu W.
Plant Physiol. 2019  181(4)  1600-1614
<i>RETINOBLASTOMA-RELATED</i> Genes Specifically Control Inner Floral Organ Morphogenesis and pollen Development in Rice.
Kong L., Duan Y., Ye Y., Cai Z., Wang F., Qu X., Qiu R., Wu C., Wu W.
PLoS ONE 2019  14(8)  e0221473
Screening and analysis of proteins interacting with OsMADS16 in rice (Oryza sativa L.).
Singh P., Mathew I.E., Verma A., Tyagi A.K., Agarwal P.
Int J Mol Sci 2019  20(7) 
Analysis of Rice Proteins with DLN repressor Motif/S.
Wang J., Wang R., Wang Y., Zhang L., Zhang L., Xu Y., Yao S.
Plant J. 2017   
SHORT and Solid Culm/RFL/APO2 for culm development in rice.
Yu H., Ruan B., Wang Z., Ren D., Zhang Y., Leng Y., Zeng D., Hu J., Zhang G., Zhu L., Gao Z., Chen G., Guo L., Chen W., Qian Q.
Front Plant Sci 2017  8  486
Fine Mapping of a Novel defective glume 1 (dg1) Mutant, Which Affects Vegetative and Spikelet Development in Rice.
Ren D., Rao Y., Wu L., Xu Q., Li Z., Yu H., Zhang Y., Leng Y., Hu J., Zhu L., Gao Z., Dong G., Zhang G., Guo L., Zeng D., Qian Q.
J Integr Plant Biol 2015   
The pleiotropic ABNORMAL FLOWER AND DWARF1 affects plant height, floral development and grain yield in rice.
Marathi B., Jena K.K.
Euphytica 2014  201  1-14
Floral traits to enhance outcrossing for higher hybrid seed production in rice: present status and future prospects
Wei,R.X. and Ge,S.
J Integr Plant Biol 2011  53(8)  682-693
Evolutionary history and complementary selective relaxation of the duplicated PI genes in grasses
Shan-Guo Yao, Ohmori S., Kimizu M., Yoshida H.
Plant Cell Physiol. 2008  49(5)  853-7
Unequal genetic redundancy of rice PISTILLATA orthologs, OsMADS2 and OsMADS4, in lodicule and stamen development.
Shri Ram Yadav, Prasad K., Vijayraghavan U.
Genetics 2007  176(1)  283-94
Divergent regulatory OsMADS2 functions control size, shape and differentiation of the highly derived rice floret second-whorl organ.
Arora R., Agarwal P., Ray S., Ashok Kumar Singh, Vijay Pal Singh, Akhilesh K Tyagi, Kapoor S.
BMC Genomics 2007  8  242
MADS-box gene family in rice: genome-wide identification, organization and expression profiling during reproductive development and stress.
Prasad K., Vijayraghavan U.
Genetics 2003  165(4)  2301-5
Double-stranded RNA interference of a rice PI/GLO paralog, OsMADS2, uncovers its second-whorl-specific function in floral organ patterning.
Lee,S., Kim,J., Son,J.S., Nam,J., Jeong,D.H., Lee,K., Jang,S., Yoo,J., Lee,J., Lee,D.Y., Kang,H.G. and An,G.
Plant Cell Physiol. 2003  44(12)  1403-1411
Systematic Reverse Genetic Screening of T-DNA Tagged Genes in Rice for Functional Genomic Analyses: MADS-box Genes as a Test Case.
Kyozuka,J., Kobayashi,T., Morita,M. and Shimamoto,K.
Plant Cell Physiol. 2000  41(6)  710-718
Spatially and temporally regulated expression of rice MADS bos genes with similarity to Arabidopsis class A, B, C genes
Yuan,Z., Qian,X., Liu,J., Liu,J., Qian,M., Yang,J. and Liu,J.
Prog. Nat. Sci. 2000  10  357-363
Cloning and characterization of two cDNAs encoding rice MADS box protein
Chung,Y.-Y., Kim,S.-R., Kang,H.-G., Noh,Y.-S., Park,M.C. and An,G.
Plant Sci. 1995  109  45-56
Characterization of two rice MADS box genes homologous to GLOBOSA
TextPresso Search Search textpresso for MADS2 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0061386
Gene Ontology cell differentiation( GO:0030154 )
sequence-specific DNA binding( GO:0043565 )
DNA binding( GO:0003677 )
transcription factor activity( GO:0003700 )
nucleus( GO:0005634 )
transcription( GO:0006350 )
flower development( GO:0009908 )
regulation of transcription, DNA-dependent( GO:0006355 )
Trait Ontology flower anatomy and morphology trait( TO:0000499 )
cytoplasmic male sterility( TO:0000580 )
flower development trait( TO:0000622 )
Plant Ontology flower( PO:0009046 )
flower development stage( PO:0007615 )
Related Strains
Phenotype images
Last updated
Oct 19, 2022