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Basic Information
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CGSNL Gene Symbol
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TPC1
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Gene Symbol Synonym
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OsTPC1, Tpc1, OsCC1, OsCL1 pore
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CGSNL Gene Name
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TWO-PORE CHANNEL 1
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Gene Name Synonym
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Two pore calcium channel protein 1, Two-pore channel 1, Voltage-dependent calcium channel protein TPC1
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Protein Name
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TWO-PORE CHANNEL 1
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Allele
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Chromosome No.
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1
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Explanation
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OsTPC1 functions as a Ca2+-permiable channel involved in the regulation of growth and development. Ca2+-permiable channel. Q5QM84.
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Trait Class
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Biochemical character
Vegetative organ - Culm
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK067839
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MSU ID
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LOC_Os01g48680.1
LOC_Os01g48680.2
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RAP ID
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Os01g0678500
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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Link to INSD Accession List
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Shanmugam S., Boyett V.A., Khodakovskaya M.
PLoS ONE 2021 16(10) e0258171
Enhancement of drought tolerance in rice by silencing of the OsSYT-5 gene.
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Singh U.M., Metwal M., Singh M., Taj G., Kumar A.
Gene 2015 566(1) 37-46
Identification and characterization of calcium transporter gene family in finger millet in relation to grain calcium content.
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Singh A., Kanwar P., Yadav A.K., Mishra M., Jha S.K., Baranwal V., Pandey A., Kapoor S., Tyagi A.K., Pandey G.K.
FEBS J. 2014 281(3) 894-915
Genome-wide expressional and functional analysis of calcium transport elements during abiotic stress and development in rice.
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Jung K.H., Kim S.R., Giong H.K., Nguyen M.X., Go H.J., An G.
Mol Plant 2014
Genome-wide Identification and Functional Analysis of Genes Expressed Ubiquitously in Rice.
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Hashimoto,K., Saito,M., Matsuoka,H., Iida,K. and Iida,H.
Plant Cell Physiol. 2004 45(4) 496-500
Functional Analysis of a Rice Putative Voltage-Dependent Ca(2+) Channel, OsTPC1, Expressed in Yeast Cells Lacking its Homologous Gene CCH1.
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Kurusu,T., Sakurai,Y., Miyao,A., Hirochika,H. and Kuchitsu,K.
Plant Cell Physiol. 2004 45(6) 693-702
Identification of a Putative Voltage-Gated Ca(2+)-permeable Channel (OsTPC1) Involved in Ca(2+) Influx and Regulation of Growth and Development in Rice.
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DB Reference
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Gramene ID
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GR:0010807
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Ontologies
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Gene Ontology
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membrane( GO:0016020 )
integral to membrane( GO:0016021 )
calcium channel activity( GO:0005262 )
calcium ion binding( GO:0005509 )
voltage-gated ion channel activity( GO:0005244 )
defense response( GO:0006952 )
transmembrane transport( GO:0055085 )
voltage-gated calcium channel activity( GO:0005245 )
ion channel activity( GO:0005216 )
mitochondrion( GO:0005739 )
calcium ion transport( GO:0006816 )
secretion by cell( GO:0032940 )
cytoplasmic membrane-bounded vesicle( GO:0016023 )
plasma membrane( GO:0005886 )
plant-type hypersensitive response( GO:0009626 )
cation channel activity( GO:0005261 )
cation transport( GO:0006812 )
ion transport( GO:0006811 )
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Trait Ontology
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plant height( TO:0000207 )
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Plant Ontology
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-
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Related Strains
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-
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Phenotype images
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-
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Last updated
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May 17, 2022
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