Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol TPC1
Gene Symbol Synonym OsTPC1, Tpc1, OsCC1, OsCL1 pore
CGSNL Gene Name TWO-PORE CHANNEL 1
Gene Name Synonym Two pore calcium channel protein 1, Two-pore channel 1, Voltage-dependent calcium channel protein TPC1
Protein Name TWO-PORE CHANNEL 1
Allele
Chromosome No. 1
Explanation OsTPC1 functions as a Ca2+-permiable channel involved in the regulation of growth and development. Ca2+-permiable channel. Q5QM84. LOC_Os01g48680.
Trait Class Biochemical character
Vegetative organ - Culm
Expression
Sequence/Locus
cDNA Accession No. AK067839
MSU ID LOC_Os01g48680.1
LOC_Os01g48680.2
RAP ID Os01g0678500
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Singh U.M., Metwal M., Singh M., Taj G., Kumar A.
Gene 2015  566(1)  37-46
Identification and characterization of calcium transporter gene family in finger millet in relation to grain calcium content.
Singh A., Kanwar P., Yadav A.K., Mishra M., Jha S.K., Baranwal V., Pandey A., Kapoor S., Tyagi A.K., Pandey G.K.
FEBS J. 2014  281(3)  894-915
Genome-wide expressional and functional analysis of calcium transport elements during abiotic stress and development in rice.
Jung K.H., Kim S.R., Giong H.K., Nguyen M.X., Go H.J., An G.
Mol Plant 2014   
Genome-wide Identification and Functional Analysis of Genes Expressed Ubiquitously in Rice.
Hashimoto,K., Saito,M., Matsuoka,H., Iida,K. and Iida,H.
Plant Cell Physiol. 2004  45(4)  496-500
Functional Analysis of a Rice Putative Voltage-Dependent Ca(2+) Channel, OsTPC1, Expressed in Yeast Cells Lacking its Homologous Gene CCH1.
Kurusu,T., Sakurai,Y., Miyao,A., Hirochika,H. and Kuchitsu,K.
Plant Cell Physiol. 2004  45(6)  693-702
Identification of a Putative Voltage-Gated Ca(2+)-permeable Channel (OsTPC1) Involved in Ca(2+) Influx and Regulation of Growth and Development in Rice.
TextPresso Search Search textpresso for TPC1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0010807
Ontologies
Gene Ontology membrane( GO:0016020 )
integral to membrane( GO:0016021 )
calcium channel activity( GO:0005262 )
calcium ion binding( GO:0005509 )
voltage-gated ion channel activity( GO:0005244 )
defense response( GO:0006952 )
transmembrane transport( GO:0055085 )
voltage-gated calcium channel activity( GO:0005245 )
ion channel activity( GO:0005216 )
mitochondrion( GO:0005739 )
cation transport( GO:0006812 )
ion transport( GO:0006811 )
calcium ion transport( GO:0006816 )
secretion by cell( GO:0032940 )
cytoplasmic membrane-bounded vesicle( GO:0016023 )
plasma membrane( GO:0005886 )
plant-type hypersensitive response( GO:0009626 )
cation channel activity( GO:0005261 )
Trait Ontology plant height( TO:0000207 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Oct 16, 2015


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