Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol RPOTP
Gene Symbol Synonym OsRpo Tp, OsRpoTp, NEP, RpoTp
CGSNL Gene Name RNA POLYMERASE
Gene Name Synonym RNA polymerase, Nuclear-Encoded Plastid RNA Polymerase, T3/T7-like RNA polymerase
Protein Name RNA POLYMERASE
Allele
Chromosome No. 6
Explanation This gene encodes phage-type RNA polymerase, being localized to plastids and mitocondria. OsRpo Tp expression occurs at an early stage of leaf development. AB120430. U34283, D24565, D23514. Y11599.
Trait Class Biochemical character
Expression
Sequence/Locus
cDNA Accession No. AK069977
RAP ID Os06g0652000
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Lin D., Zheng K., Liu Z., Li Z., Teng S., Xu J., Dong Y.
Plant Genome 2018  11(1) 
Rice <i>TCM1</i> Encoding a Component of the TAC Complex is Required for Chloroplast Development under Cold Stress.
Xiao H., Xu Y., Ni C., Zhang Q., Zhong F., Huang J., Liu W., Peng L., Zhu Y., Hu J.
J. Exp. Bot. 2018  69(12)  2923-2936
A rice dual-localized pentatricopeptide repeat protein is involved in organellar RNA editing together with OsMORFs.
Zhang Z., Cui X., Wang Y., Wu J., Gu X., Lu T.
Mol Plant 2017  10(1)  86-98
The RNA Editing Factor wsp1 Is Essential for Chloroplast Development in Rice.
Wang Y., Zhang J., Shi X., Peng Y., Li P., Lin D., Dong Y., Teng S.
J. Exp. Bot. 2016   
Temperature-sensitive albino gene tcd5, encoding a monooxygenase, affects chloroplast development at low temperatures.
Jiang Q.a, Mei J.a, Gong X.D.a, Xu J.L.b, Zhang J.H.c, Teng S.c, Lin D.Z.a, Dong Y.J.a
Plant Science 2014  215-216  172-179
Importance of the rice tcd9 encoding alpha subunit of chaperonin protein 60 (Cpn60alpha) for the chloroplast development during the early leaf stage
Dong H., Fei G.L., Wu C.Y., Wu F.Q., Sun Y.Y., Chen M.J., Ren Y.L., Zhou K.N., Cheng Z.J., Wang J.L., Jiang L., Zhang X., Guo X.P., Lei C.L., Su N., Wang H., Wan J.M.
Plant Physiol. 2013  162(4)  1867-80
A rice virescent-yellow leaf mutant reveals new insights into the role and assembly of plastid caseinolytic protease in higher plants.
Nakamura H,Muramatsu M,Hakata M,Ueno O,Nagamura Y,Hirochika H,Takano M,Ichikawa H
Plant Cell Physiol. 2009  50(11)  1933-49
Ectopic overexpression of the transcription factor OsGLK1 induces chloroplast development in non-green rice cells.
Kusumi, K., A. Yara, N. Mitsui, Y. Tozawa and K. Iba
Plant Cell Physiol. 2004  45 (9)  1194-1201
Characterization of a rice nuclear-encoded plastid RNA polymerase gene OsRpo Tp.
Sugimoto, H., K. Kusumi, Y. Tozawa, J. Yazaki, N. Kishimoto, S. Kikuchi and K. Iba
Plant Cell Physiol. 2004  45  985-996
The virescent-2, mutation inhibits translation of plastid transcripts for the plastid genetic system at an early stage of chloroplast differentiation.
Weihe,A., Hedtke,B. and Borner,T.
Nucleic Acids Res. 1997  25(12)  2319-2325
Cloning and characterization of a cDNA encoding a bacteriophage-type RNA polymerase from the higher plant Chenopodium album.
Cermakian,N., Ikeda,T.M., Cedergren,R. and Gray,M.W.
Nucleic Acids Res. 1996  24(4)  648-654
Sequences homologous to yeast mitochondrial and bacteriophage T3 and T7 RNA polymerases are widespread throughout the eukaryotic lineage.
TextPresso Search Search textpresso for RPOTP ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology transcription( GO:0006350 )
chloroplast( GO:0009507 )
DNA binding( GO:0003677 )
transcription, DNA-dependent( GO:0006351 )
plastid( GO:0009536 )
DNA-directed RNA polymerase activity( GO:0003899 )
Trait Ontology -
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Jan 30, 2019


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