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Basic Information
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CGSNL Gene Symbol
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RPOTP
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Gene Symbol Synonym
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OsRpo Tp, OsRpoTp, NEP, RpoTp, rpoTP2
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CGSNL Gene Name
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RNA POLYMERASE
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Gene Name Synonym
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RNA polymerase, Nuclear-Encoded Plastid RNA Polymerase, T3/T7-like RNA polymerase
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Protein Name
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RNA POLYMERASE
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Allele
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Chromosome No.
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6
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Explanation
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This gene encodes phage-type RNA polymerase, being localized to plastids and mitocondria. OsRpo Tp expression occurs at an early stage of leaf development. AB120430. U34283, D24565, D23514. Y11599. rpoTP2 in Zhou et al. 2021.
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Trait Class
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Biochemical character
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK058530
AK069977
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MSU ID
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LOC_Os06g44230.1
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RAP ID
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Os06g0652000
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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Link to INSD Accession List
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Lin D., Zhang T., Chen Y., Fan M., Kong R., Chen L., Wang Y., Xu J., Dong Y.
Biology (Basel) 2022 11(12)
Rice <i>TCD8</i> Encoding a multi-domain GTPase Is Crucial for Chloroplast Development of Early Leaf Stage at Low Temperatures.
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Zhou K., Zhang C., Xia J., Yun P., Wang Y., Ma T., Li Z.
Rice (N Y) 2021 14(1) 47
Albino seedling lethality 4; Chloroplast 30S Ribosomal Protein S1 is Required for Chloroplast Ribosome Biogenesis and Early Chloroplast Development in Rice.
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Fang G., Yang S., Ruan B., Liu C., Zhang A., Jiang H., Ding S., Tian B., Zhang Y., Jahan N., Zhu L., Zhang G., Dong G., Zhang Q., Zeng D., Guo L., Gao Z., Qian Q.
Rice (N Y) 2020 13(1) 49
Isolation of TSCD11 Gene for Early Chloroplast Development under High Temperature in Rice.
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Zhang Q., Shen L., Ren D., Hu J., Zhu L., Gao Z., Zhang G., Guo L., Zeng D., Qian Q.
Biomolecules 2020 10(2)
Characterization of the CRM Gene Family and Elucidating the Function of OsCFM2 in Rice.
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Wang H., Shi Y., Zhang X., Xu X., Wu J.L.
Int J Mol Sci 2020 21(4)
Characterization of a Novel Rice Dynamic Narrow-rolled leaf Mutant with Deficiencies in Aromatic Amino Acids.
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Xiao H., Xu Y., Ni C., Zhang Q., Zhong F., Huang J., Liu W., Peng L., Zhu Y., Hu J.
J. Exp. Bot. 2018 69(12) 2923-2936
A rice dual-localized pentatricopeptide repeat protein is involved in organellar RNA editing together with OsMORFs.
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Lin D., Zheng K., Liu Z., Li Z., Teng S., Xu J., Dong Y.
Plant Genome 2018 11(1)
Rice <i>TCM1</i> Encoding a Component of the TAC Complex is Required for Chloroplast Development under Cold Stress.
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Zhang Z., Cui X., Wang Y., Wu J., Gu X., Lu T.
Mol Plant 2017 10(1) 86-98
The RNA Editing Factor wsp1 Is Essential for Chloroplast Development in Rice.
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Wang Y., Zhang J., Shi X., Peng Y., Li P., Lin D., Dong Y., Teng S.
J. Exp. Bot. 2016
Temperature-sensitive albino gene tcd5, encoding a monooxygenase, affects chloroplast development at low temperatures.
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Jiang Q.a, Mei J.a, Gong X.D.a, Xu J.L.b, Zhang J.H.c, Teng S.c, Lin D.Z.a, Dong Y.J.a
Plant Science 2014 215-216 172-179
Importance of the rice tcd9 encoding alpha subunit of chaperonin protein 60 (Cpn60alpha) for the chloroplast development during the early leaf stage
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Dong H., Fei G.L., Wu C.Y., Wu F.Q., Sun Y.Y., Chen M.J., Ren Y.L., Zhou K.N., Cheng Z.J., Wang J.L., Jiang L., Zhang X., Guo X.P., Lei C.L., Su N., Wang H., Wan J.M.
Plant Physiol. 2013 162(4) 1867-80
A rice virescent-yellow leaf mutant reveals new insights into the role and assembly of plastid caseinolytic protease in higher plants.
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Nakamura H,Muramatsu M,Hakata M,Ueno O,Nagamura Y,Hirochika H,Takano M,Ichikawa H
Plant Cell Physiol. 2009 50(11) 1933-49
Ectopic overexpression of the transcription factor OsGLK1 induces chloroplast development in non-green rice cells.
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Sugimoto, H., K. Kusumi, Y. Tozawa, J. Yazaki, N. Kishimoto, S. Kikuchi and K. Iba
Plant Cell Physiol. 2004 45 985-996
The virescent-2, mutation inhibits translation of plastid transcripts for the plastid genetic system at an early stage of chloroplast differentiation.
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Kusumi, K., A. Yara, N. Mitsui, Y. Tozawa and K. Iba
Plant Cell Physiol. 2004 45 (9) 1194-1201
Characterization of a rice nuclear-encoded plastid RNA polymerase gene OsRpo Tp.
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Weihe,A., Hedtke,B. and Borner,T.
Nucleic Acids Res. 1997 25(12) 2319-2325
Cloning and characterization of a cDNA encoding a bacteriophage-type RNA polymerase from the higher plant Chenopodium album.
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Cermakian,N., Ikeda,T.M., Cedergren,R. and Gray,M.W.
Nucleic Acids Res. 1996 24(4) 648-654
Sequences homologous to yeast mitochondrial and bacteriophage T3 and T7 RNA polymerases are widespread throughout the eukaryotic lineage.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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DNA binding( GO:0003677 )
transcription( GO:0006350 )
chloroplast( GO:0009507 )
transcription, DNA-dependent( GO:0006351 )
plastid( GO:0009536 )
DNA-directed RNA polymerase activity( GO:0003899 )
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Trait Ontology
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Plant Ontology
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Related Strains
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Phenotype images
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Last updated
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Jul 3, 2023
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