Gene - Detail

Detail of Gene

Click here for feedback

Basic Information
CGSNL Gene Symbol PNH1
Gene Symbol Synonym OsPNH1
Gene Name Synonym Oryza sativa pinhead1, PINHEAD1, ZLL/PNH homologous protein, Protein argonaute PNH1, Protein PINHEAD homolog 1, pinhead1, OsPINHEAD1
Chromosome No. 6
Explanation This is a rice homologue of PINHEAD/ZWILLE (PNH/Zll) of Arabidopsis, which plays important roll in the formation of the shoot apical meristem (SAM) and in leaf adaxial cell specification. OsPNH1 is located on chromosome 6 between RFLP markers G122 and G1314A. LOC_Os06g39640. AB081950. Q69VD5. PO:0000225; peripheral zone ; PO:0006019; leaf abaxial epidermis ; PO:0000230; inflorescence meristem ; PO:0004726; adaxial side of leaf primordium ; PO:0006023; bundle sheath ; PO:0009015; vascular tissue ; PO:0000036; leaf vascular system ; PO:0006018; leaf adaxial epidermis. GRO:0007139; A-vegetative stage ; GRO:0007190; panicle stage PA6.
Trait Class Vegetative organ - Shoot apical meristem(SAM)
Vegetative organ - Leaf
Expression leaf - P0 - Formation of leaf founder cells
leaf - P1 - Formation of leaf primordium
leaf - P2 - Hood-shape primordium
leaf - P3 - Formation of ligule primordium
leaf - P4 - Rapid elongation of leaf blade
cDNA Accession No. CT836234
MSU ID LOC_Os06g39640.1
RAP ID Os06g0597400
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Link map Classical linkage map
Huang X., Peng X., Sun M.X.
New Phytol. 2017  215(3)  1039-1058
OsGCD1 is essential for rice fertility and required for embryo dorsal-ventral pattern formation and endosperm development.
Yi J., Lee Y.S., Lee D.Y., Cho M.H., Jeon J.S., An G.
J. Exp. Bot. 2016  67(8)  2425-37
OsMPK6 plays a critical role in cell differentiation during early embryogenesis in Oryza sativa.
Ohmori Y.a b, Yasui Y.a, Hirano H.Y.a
Genes and Genetic Systems 2014  89  87-91
Overexpression analysis suggests that FON2-LIKE CLE PROTEIN1 is involved in rice LEAF development
Ishiwata A., Ozawa M., Nagasaki H., Kato M., Noda Y., Yamaguchi T., Nosaka M., Shimizu-Sato S., Nagasaki A., Maekawa M., Hirano H.Y., Sato Y.
Plant Cell Physiol. 2013  54(5)  779-92
Two WUSCHEL-related homeobox Genes, narrow leaf2 and narrow leaf3, Control leaf width in Rice.
Nishimura,A., Ito,M., Kamiya,N., Sato,Y. and Matsuoka,M.
Plant J. 2002  30(2)  189-201
OsPNH1 regulates leaf development and maintenance of the shoot apical meristem in rice.
TextPresso Search Search textpresso for PNH1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0080013
Gene Ontology nucleic acid binding( GO:0003676 )
translation initiation factor activity( GO:0003743 )
cytoplasm( GO:0005737 )
leaf development( GO:0048366 )
meristem maintenance( GO:0010073 )
stem cell maintenance( GO:0019827 )
gene silencing by RNA( GO:0031047 )
Trait Ontology leaf shape( TO:0000492 )
vascular bundle number( TO:0000472 )
plant height( TO:0000207 )
meristem identity( TO:0006017 )
Plant Ontology leaf vascular system( PO:0000036 )
peripheral zone( PO:0000225 )
inflorescence meristem( PO:0000230 )
adaxial side of leaf primordium( PO:0004726 )
leaf adaxial epidermis( PO:0006018 )
leaf abaxial epidermis( PO:0006019 )
bundle sheath( PO:0006023 )
portion of vascular tissue( PO:0009015 )
Related Strains
Phenotype images
Last updated
Jan 7, 2018

Login ID