Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol PNH1
Gene Symbol Synonym OsPNH1
Gene Name Synonym Oryza sativa pinhead1, PINHEAD1, ZLL/PNH homologous protein, Protein argonaute PNH1, Protein PINHEAD homolog 1, pinhead1, OsPINHEAD1
Chromosome No. 6
Explanation This is a rice homologue of PINHEAD/ZWILLE (PNH/Zll) of Arabidopsis, which plays important roll in the formation of the shoot apical meristem (SAM) and in leaf adaxial cell specification. OsPNH1 is located on chromosome 6 between RFLP markers G122 and G1314A. AB081950. Q69VD5. GRO:0007139; A-vegetative stage ; GRO:0007190; panicle stage PA6.
Trait Class Vegetative organ - Shoot apical meristem(SAM)
Vegetative organ - Leaf
Expression leaf - P0 - Formation of leaf founder cells
leaf - P1 - Formation of leaf primordium
leaf - P2 - Hood-shape primordium
leaf - P3 - Formation of ligule primordium
leaf - P4 - Rapid elongation of leaf blade
cDNA Accession No. CT836234
MSU ID LOC_Os06g39640.1
RAP ID Os06g0597400
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Link map Classical linkage map
Qi D., Wen Q., Meng Z., Yuan S., Guo H., Zhao H., Cui S.
Plant J. 2020  104(4)  901-916
OsLFR is essential for early endosperm and embryo development by interacting with SWI/SNF complex members in Oryza sativa.
Li Y., Yang Y., Liu Y., Li D., Zhao Y., Li Z., Liu Y., Jiang D., Li J., Zhou H., Chen J., Zhuang C., Liu Z.
Rice (N Y) 2019  12(1)  60
Overexpression of OsAGO1b Induces Adaxially Rolled Leaves by Affecting Leaf Abaxial Sclerenchymatous Cell Development in Rice.
Liu S., Fu H., Jiang J., Chen Z., Gao J., Shu H., Zhang S., Yang C., Liu J.
Front Plant Sci 2019  10  848
Overexpression of a CPYC-Type Glutaredoxin, <i>OsGrxC2.2</i>, Causes Abnormal Embryos and an Increased grain weight in Rice.
Huang X., Peng X., Sun M.X.
New Phytol. 2017  215(3)  1039-1058
OsGCD1 is essential for rice fertility and required for embryo dorsal-ventral pattern formation and endosperm development.
Yi J., Lee Y.S., Lee D.Y., Cho M.H., Jeon J.S., An G.
J. Exp. Bot. 2016  67(8)  2425-37
OsMPK6 plays a critical role in cell differentiation during early embryogenesis in Oryza sativa.
Ohmori Y.a b, Yasui Y.a, Hirano H.Y.a
Genes and Genetic Systems 2014  89  87-91
Overexpression analysis suggests that FON2-LIKE CLE PROTEIN1 is involved in rice LEAF development
Ishiwata A., Ozawa M., Nagasaki H., Kato M., Noda Y., Yamaguchi T., Nosaka M., Shimizu-Sato S., Nagasaki A., Maekawa M., Hirano H.Y., Sato Y.
Plant Cell Physiol. 2013  54(5)  779-92
Two WUSCHEL-related homeobox Genes, narrow leaf2 and narrow leaf3, Control leaf width in Rice.
Nishimura,A., Ito,M., Kamiya,N., Sato,Y. and Matsuoka,M.
Plant J. 2002  30(2)  189-201
OsPNH1 regulates leaf development and maintenance of the shoot apical meristem in rice.
TextPresso Search Search textpresso for PNH1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0080013
Gene Ontology nucleic acid binding( GO:0003676 )
translation initiation factor activity( GO:0003743 )
cytoplasm( GO:0005737 )
leaf development( GO:0048366 )
meristem maintenance( GO:0010073 )
stem cell maintenance( GO:0019827 )
gene silencing by RNA( GO:0031047 )
Trait Ontology leaf shape( TO:0000492 )
vascular bundle number( TO:0000472 )
meristem identity( TO:0006017 )
plant height( TO:0000207 )
Plant Ontology leaf vascular system( PO:0000036 )
peripheral zone( PO:0000225 )
inflorescence meristem( PO:0000230 )
adaxial side of leaf primordium( PO:0004726 )
leaf adaxial epidermis( PO:0006018 )
leaf abaxial epidermis( PO:0006019 )
portion of vascular tissue( PO:0009015 )
bundle sheath( PO:0006023 )
Related Strains
Phenotype images
Last updated
Dec 24, 2021