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Basic Information
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CGSNL Gene Symbol
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OSH6
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Gene Symbol Synonym
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OsH6, HOS16
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CGSNL Gene Name
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HOMEOBOX 6
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Gene Name Synonym
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Oryza sativa homeobox6, Rice KNOX gene-6, Homeobox protein knotted-1-like 1, Homeobox protein OSH6, Homeobox protein HOS16, Oryza sativa Homeobox 6
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Protein Name
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HOMEOBOX PROTEIN OSH6
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Allele
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osh6, osh6-1, osh6-2, osh6-3, osh6-4, osh6-5, osh6-6
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Chromosome No.
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1
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Explanation
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Knotted-type homeobox gene which shows specific expression in the embryo, shoot and flower organ primordium. Q9FP29. ortholog of maize Lg3 (Liguleless3). TO:0001066: number of metaxylem vessels. TO:0000739: shoot axis morphology trait. TO:0000985: root system morphology trait.
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Trait Class
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Vegetative organ - Shoot apical meristem(SAM)
Vegetative organ - Culm
Vegetative organ - Root
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK241312
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MSU ID
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LOC_Os01g19694.1
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RAP ID
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Os01g0302500
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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Link to INSD Accession List
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Reeger J.E., Wheatley M., Yang Y., Brown K.M.
Plant Direct 2021 5(6) e00328
Targeted mutation of transcription factor genes alters metaxylem vessel size and number in rice roots.
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Liu X., Wen-Jing Cai, Yin X., Yang D., Dong T., Yu-Qi Feng, Wu Y.
J. Exp. Bot. 2019
Two dioxygenases, slc1 and SLC2, play essential roles in shoot development of rice.
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Park S.H., Yun D.W., Lee G.S., Yoon, Ung-Han, Ji H.S., Ahn B.O., Park S.C., Kim Y.H., Kim Y.K., Kim C.K.
African Journal of Biotechnology 2011 10 1802-1811
Molecular and genetic characterization of osh6 (Oryza sativa homeobox 6) using dissociation (Ds) insertion mutant rice
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Tsuda K., Ito Y., Sato Y., Kurata N.
Plant Cell 2011 23(12) 4368-81
Positive autoregulation of a KNOX gene is essential for shoot apical meristem maintenance in rice.
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Tsuda K., Ito Y., Yamaki S., Miyao A., Hirochika H., Kurata N.
Plant Science 2009 177 131-135
Isolation and mapping of three rice mutants that showed ectopic expression of KNOX genes in leaves
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Jain M,Tyagi AK,Khurana JP
FEBS J. 2008 275 2845-61
Genome-wide identification, classification, evolutionary expansion and expression analyses of homeobox genes in rice.
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Ito, Y., Eiguchi, M. and Kurata, N.
Genesis 2001 30 231-238
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Sentoku, N., Sato, Y. and Matsuoka, M.
Dev. Biol. 2000 220 358-364
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Sentoku,N., Sato,Y., Kurata,N., Ito,Y., Kitano,H. and Matsuoka,M.
Plant Cell 1999 11(9) 1651-1663
Regional expression of the rice KN1-type homeobox gene family during embryo, shoot, and flower development.
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TextPresso Search
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Search textpresso for OSH6
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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GR:0061311
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Ontologies
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Gene Ontology
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metaxylem development( GO:0090058 )
transcription factor activity( GO:0003700 )
nucleus( GO:0005634 )
regulation of transcription, DNA-dependent( GO:0006355 )
sequence-specific DNA binding( GO:0043565 )
DNA binding( GO:0003677 )
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Trait Ontology
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leaf shape( TO:0000492 )
vascular tissue related trait( TO:0000470 )
deep root number( TO:0001009 )
shoot dry weight( TO:0000552 )
crown root number( TO:0002685 )
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Plant Ontology
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vascular leaf( PO:0009025 )
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Related Strains
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-
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Phenotype images
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-
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Last updated
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Sep 22, 2021
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