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Basic Information
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CGSNL Gene Symbol
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OSH6
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Gene Symbol Synonym
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OsH6, HOS16
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CGSNL Gene Name
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HOMEOBOX 6
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Gene Name Synonym
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Oryza sativa homeobox6, Rice KNOX gene-6, Homeobox protein knotted-1-like 1, Homeobox protein OSH6, Homeobox protein HOS16, Oryza sativa Homeobox 6
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Protein Name
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HOMEOBOX PROTEIN OSH6
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Allele
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osh6, osh6-1, osh6-2, osh6-3, osh6-4, osh6-5, osh6-6
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Chromosome No.
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1
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Explanation
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Knotted-type homeobox gene which shows specific expression in the embryo, shoot and flower organ primordium. Q9FP29. ortholog of maize Lg3 (Liguleless3). TO:0001066: number of metaxylem vessels. TO:0000739: shoot axis morphology trait. TO:0000985: root system morphology trait.
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Trait Class
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Vegetative organ - Shoot apical meristem(SAM)
Vegetative organ - Culm
Vegetative organ - Root
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK241312
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MSU ID
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LOC_Os01g19694.1
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RAP ID
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Os01g0302500
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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Link to INSD Accession List
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Wang L., Ming L., Liao K., Xia C., Sun S., Chang Y., Wang H., Fu D., Xu C., Wang Z., Li X., Xie W., Ouyang Y., Zhang Q., Li X., Zhang Q., Xiao J., Zhang Q.
Mol Plant 2021 14(7) 1168-1184
Bract suppression regulated by the miR156/529-SPLs-NL1-PLA1 module is required for the transition from vegetative to reproductive branching in rice.
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Reeger J.E., Wheatley M., Yang Y., Brown K.M.
Plant Direct 2021 5(6) e00328
Targeted mutation of transcription factor genes alters metaxylem vessel size and number in rice roots.
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Liu X., Wen-Jing Cai, Yin X., Yang D., Dong T., Yu-Qi Feng, Wu Y.
J. Exp. Bot. 2019
Two dioxygenases, slc1 and SLC2, play essential roles in shoot development of rice.
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Tsuda K., Ito Y., Sato Y., Kurata N.
Plant Cell 2011 23(12) 4368-81
Positive autoregulation of a KNOX gene is essential for shoot apical meristem maintenance in rice.
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Park S.H., Yun D.W., Lee G.S., Yoon, Ung-Han, Ji H.S., Ahn B.O., Park S.C., Kim Y.H., Kim Y.K., Kim C.K.
African Journal of Biotechnology 2011 10 1802-1811
Molecular and genetic characterization of osh6 (Oryza sativa homeobox 6) using dissociation (Ds) insertion mutant rice
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Tsuda K., Ito Y., Yamaki S., Miyao A., Hirochika H., Kurata N.
Plant Science 2009 177 131-135
Isolation and mapping of three rice mutants that showed ectopic expression of KNOX genes in leaves
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Jain M,Tyagi AK,Khurana JP
FEBS J. 2008 275 2845-61
Genome-wide identification, classification, evolutionary expansion and expression analyses of homeobox genes in rice.
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Ito, Y., Eiguchi, M. and Kurata, N.
Genesis 2001 30 231-238
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Sentoku, N., Sato, Y. and Matsuoka, M.
Dev. Biol. 2000 220 358-364
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Sentoku,N., Sato,Y., Kurata,N., Ito,Y., Kitano,H. and Matsuoka,M.
Plant Cell 1999 11(9) 1651-1663
Regional expression of the rice KN1-type homeobox gene family during embryo, shoot, and flower development.
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DB Reference
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Gramene ID
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GR:0061311
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Ontologies
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Gene Ontology
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bract development( GO:0010432 )
metaxylem development( GO:0090058 )
transcription factor activity( GO:0003700 )
nucleus( GO:0005634 )
regulation of transcription, DNA-dependent( GO:0006355 )
sequence-specific DNA binding( GO:0043565 )
DNA binding( GO:0003677 )
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Trait Ontology
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leaf shape( TO:0000492 )
vascular tissue related trait( TO:0000470 )
deep root number( TO:0001009 )
shoot dry weight( TO:0000552 )
crown root number( TO:0002685 )
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Plant Ontology
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vascular leaf( PO:0009025 )
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Related Strains
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-
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Phenotype images
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-
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Last updated
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Oct 16, 2023
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