Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol EXPA3
Gene Symbol Synonym OsEXP3 (Os-EXP3), EXPA3, OsEXP3, Os-EXP3, OsaEXPa1.18, RiExD, Os-EXPA3, OsEXPA3
CGSNL Gene Name ALPHA-EXPANSIN 3
Gene Name Synonym Rice expansin-3, Expansin-A3, Alpha-expansin-3
Protein Name ALPHA-EXPANSIN 3
Allele
Chromosome No. 5
Explanation This gene controls the expansin which is a protein catalyzing long-term extension of isolated cell walls. Q40637. U30479(cDNA). D23861. GO:0090548: response to nitrate starvation.
Trait Class Biochemical character
Vegetative organ - Root
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK060313
MSU ID LOC_Os05g19570.1
RAP ID Os05g0276500
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Jang S., Cho J.Y., Do G.R., Kang Y., Li H.Y., Song J., Kim H.Y., Kim B.G., Hsing Y.I.
Int J Mol Sci 2021  22(15) 
Modulation of Rice leaf angle and grain size.by Expressing <i>OsBCL1</i> and <i>OsBCL2</i> under the Control of <i>OsBUL1</i> Promoter.
Seo H., Kim S.H., Lee B.D., Lim J.H., Lee S.J., An G., Paek N.C.
Int J Mol Sci 2020  21(6) 
The Rice <i>Basic Helix-Loop-Helix 79</i> (<i>OsbHLH079</i>) Determines leaf angle and Grain Shape.
Liu H., Ren D., Jiang L., Li X., Yao Y., Mi L., Chen W., Mo A., Jiang N., Yang J., Chen P., Ma H., Luo X., Lu P.
Plant Cell 2020   
A Natural Variation in PLEIOTROPIC DEVELOPMENTAL DEFECTS Uncovers a Crucial Role for Chloroplast tRNA Modification in Translation and Plant Development.
Jang S., Li H.Y.
Front Plant Sci 2017  8  1253
Oryza sativa BRASSINOSTEROID UPREGULATED1 LIKE1 Induces the Expression of a Gene Encoding a Small Leucine-Rich-Repeat Protein to Positively Regulate Lamina Inclination and grain size.in Rice.
Qiu S., Ma N., Che S., Wang Y., Peng X., Zhang G., Wang G., Huang J.
Crop Sci. 2014  54  2201-2213
Repression of OsEXPA3 expression leads to root system growth suppression in rice
Jun-Hye Shin, Dong-Hoon Jeong, Min Chul Park, An G.
Mol. Cells 2005  20(2)  210-8
Characterization and transcriptional expression of the alpha-expansin gene family in rice.
Lee,Y. and Kende,H.
Plant Physiol. 2002  130(3)  1396-1405
Expression of alpha-Expansin and Expansin-Like Genes in Deepwater Rice.
Lee,Y., Choi,D. and Kende,H.
Curr. Opin. Plant Biol. 2001  4(6)  527-532
Expansins: ever-expanding numbers and functions.
Cho, H.T. and H. Kende
Plant J. 1998  15(6)  805-812
Tissue localization of expansins in deepwater rice.
Cho,H.T. and Kende,H.
Plant Cell 1997  9(9)  1661-1671
Expression of expansin genes is correlated with growth in deepwater rice.
Shcherban,T.Y., Shi,J., Durachko,D.M., Guiltinan,M.J., McQueen-Mason,S.J., Shieh,M. and Cosgrove,D.J.
Proc. Natl. Acad. Sci. U.S.A. 1995  92(20)  9245-9249
Molecular cloning and sequence analysis of expansins--a highly conserved, multigene family of proteins that mediate cell wall extension in plants.
TextPresso Search Search textpresso for EXPA3 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology cell wall organization( GO:0007047 )
growth factor activity( GO:0008083 )
extracellular region( GO:0005576 )
cell wall( GO:0005618 )
plant-type cell wall organization( GO:0009664 )
cytoplasmic membrane-bounded vesicle( GO:0016023 )
extrinsic to membrane( GO:0019898 )
response to salt stress( GO:0009651 )
cellular response to phosphate starvation( GO:0016036 )
root development( GO:0048364 )
Trait Ontology root length( TO:0000227 )
root hair length( TO:0002665 )
root mass density( TO:0000115 )
salt tolerance( TO:0006001 )
Plant Ontology root development stage( PO:0007520 )
primary root( PO:0020127 )
root system( PO:0025025 )
lateral root( PO:0020121 )
Related Strains
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Phenotype images
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Last updated
Mar 4, 2022


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