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Basic Information
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CGSNL Gene Symbol
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TUB4
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Gene Symbol Synonym
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OsTUB4, TUBB4, OSTB-16, R1623, RTUB-1, Ostub16
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CGSNL Gene Name
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BETA-TUBULIN 4
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Gene Name Synonym
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beta tubulin 4, Tubulin beta-4 chain, Beta-4-tubulin, beta tubulin 1, beta-tubulin isotype 16
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Protein Name
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BETA-TUBULIN 4
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Allele
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Chromosome No.
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1
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Explanation
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This gene is one of isotype genes which control beta-tubulin, a basic component of microtubules in rice. This gene is located on chromosome 1. P45960. X78143. D30716. L19598. AJ306592 (promoter region).
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Trait Class
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Biochemical character
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK072502
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MSU ID
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LOC_Os01g59150.1
LOC_Os01g59150.2
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RAP ID
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Os01g0805900
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Wu L., Zhang M., Zhang R., Yu H., Wang H., Li J., Wang Y., Hu Z., Wang Y., Luo Z., Li L., Wang L., Peng L., Xia T.
Biotechnol Biofuels 2021 14(1) 245
Down-regulation of OsMYB103L distinctively alters beta-1,4-glucan polymerization and cellulose microfibers assembly for enhanced biomass enzymatic saccharification in rice.
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Jain M, Nijhawan A, Tyagi AK, Khurana JP.
Biochem. Biophys. Res. Commun. 2006 345(2) 646-51
Validation of housekeeping genes as internal control for studying gene expression in rice by quantitative real-time PCR.
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Yoshikawa,M., Yang,G., Kawaguchi,K. and Komatsu,S.
Plant Cell Physiol. 2003 44(11) 1202-1207
Expression Analyses of beta-tubulin Isotype Genes in Rice.
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Morello,L., Bardini,M., Sala,F. and Breviario,D.
Plant J. 2002 29(1) 33-44
A long leader intron of the Ostub16 rice beta-tubulin gene is required for high-level gene expression and can autonomously promote transcription both in vivo and in vitro.
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Breviario,D., Giani,S. and Meoni,C.
Plant Physiol. 1995 108(2) 823-824
Three rice cDNA clones encoding different beta-tubulin isotypes.
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Koga-Ban,Y., Niki,T., Nagamura,Y., Sasaki,T. and Minobe,Y.
DNA Res. 1995 2(1) 21-26
cDNA sequences of three kinds of beta-tubulins from rice.
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Kang,M.S., Choi,Y.J., Kim,M.C., Lim,C.O., Hwang,I. and Cho,M.J.
Plant Mol. Biol. 1994 26(6) 1975-1979
Isolation and characterization of two beta-tubulin cDNA clones from rice.
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TextPresso Search
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Search textpresso for TUB4
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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secondary cell wall( GO:0009531 )
GTPase activity( GO:0003924 )
structural molecule activity( GO:0005198 )
GTP binding( GO:0005525 )
microtubule( GO:0005874 )
protein polymerization( GO:0051258 )
microtubule-based movement( GO:0007018 )
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Trait Ontology
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-
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Plant Ontology
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stem( PO:0009047 )
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Related Strains
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-
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Phenotype images
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Last updated
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Jun 7, 2022
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