Update info.Gene - Detail
Detail of Gene
Click here for feedback| Basic Information | |
|---|---|
| CGSNL Gene Symbol | PLDdelta2 |
| Gene Symbol Synonym | OsPLDdelta2, RPLD5, OsPLDnu1, OsC2DP33, C2DP33 |
| CGSNL Gene Name | PHOSPHOLIPASE D DELTA 2 |
| Gene Name Synonym | Phospholipase D delta 2, Phospholipase D nu 1, C2 Domain-Containing Protein 33 |
| Protein Name | PHOSPHOLIPASE D DELTA 2 |
| Allele | |
| Chromosome No. | 3 |
| Explanation | This gene controls pholspholipase D in rice, being located on chromosome 3 at 158.2cM distal to the marker RG418X (154.4cM). AF271358. OsPLDnu1 in Elias et al. 2002. PO:0030123: panicle inflorescence. |
| Trait Class |
Biochemical character
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| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK069703
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| MSU ID |
LOC_Os03g62410.1
LOC_Os03g62410.2 |
| RAP ID |
Os03g0840800 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
Link to INSD Accession List |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
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Zhang H., Zeng Y., Seo J., Kim Y.J., Kim S.T., Kwon S.W.
Int J Mol Sci 2022 23(4) Global Identification and Characterization of C2 Domain-Containing Proteins Associated with Abiotic Stress Response in Rice (<i>Oryza sativa</i> L.).
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Li G, Lin F, Xue HW.
Cell Res 2007 17(10) 881-94. Genome-wide analysis of the phospholipase D family in Oryza sativa and functional characterization of PLD beta 1 in seed germination.
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McGee,J.D., Roe,J.L., Sweat,T.A., Wang,X., Guikema,J.A. and Leach,J.E.
Plant Cell Physiol. 2003 44(10) 1013-1026 Rice phospholipase d isoforms show differential cellular location and gene induction.
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Elias,M., Potocky,M., Cvrckova,F. and V.
BMC Genomics. 2002 3(1) 2 Molecular diversity of phospholipase D in angiosperms.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
phospholipase D activity( GO:0004630 )
NAPE-specific phospholipase D activity( GO:0070290 ) phosphatidylcholine metabolic process( GO:0046470 ) lipid catabolic process( GO:0016042 ) membrane( GO:0016020 ) calcium ion binding( GO:0005509 ) |
| Trait Ontology | - |
| Plant Ontology |
inflorescence( PO:0009049 )
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| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Jun 20, 2022 | |
