Gene - Detail
Detail of Gene
Basic Information | |
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CGSNL Gene Symbol | PLDdelta2 |
Gene Symbol Synonym | OsPLDdelta2, RPLD5, OsPLDnu1, OsC2DP33, C2DP33 |
CGSNL Gene Name | PHOSPHOLIPASE D DELTA 2 |
Gene Name Synonym | Phospholipase D delta 2, Phospholipase D nu 1, C2 Domain-Containing Protein 33 |
Protein Name | PHOSPHOLIPASE D DELTA 2 |
Allele | |
Chromosome No. | 3 |
Explanation | This gene controls pholspholipase D in rice, being located on chromosome 3 at 158.2cM distal to the marker RG418X (154.4cM). AF271358. OsPLDnu1 in Elias et al. 2002. PO:0030123: panicle inflorescence. |
Trait Class |
Biochemical character
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Expression | |
Sequence/Locus | |
cDNA Accession No. |
AK069703
|
MSU ID |
LOC_Os03g62410.1
LOC_Os03g62410.2 |
RAP ID |
Os03g0840800 |
Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
INSD Accession List (Test version) |
Link to INSD Accession List |
Map | |
Locate(cM) | |
Link map | Classical linkage map |
References | |
Zhang H., Zeng Y., Seo J., Kim Y.J., Kim S.T., Kwon S.W.
Int J Mol Sci 2022 23(4) Global Identification and Characterization of C2 Domain-Containing Proteins Associated with Abiotic Stress Response in Rice (<i>Oryza sativa</i> L.).
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Li G, Lin F, Xue HW.
Cell Res 2007 17(10) 881-94. Genome-wide analysis of the phospholipase D family in Oryza sativa and functional characterization of PLD beta 1 in seed germination.
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McGee,J.D., Roe,J.L., Sweat,T.A., Wang,X., Guikema,J.A. and Leach,J.E.
Plant Cell Physiol. 2003 44(10) 1013-1026 Rice phospholipase d isoforms show differential cellular location and gene induction.
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Elias,M., Potocky,M., Cvrckova,F. and V.
BMC Genomics. 2002 3(1) 2 Molecular diversity of phospholipase D in angiosperms.
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DB Reference | |
Gramene ID | - |
Ontologies | |
Gene Ontology |
phospholipase D activity( GO:0004630 )
NAPE-specific phospholipase D activity( GO:0070290 ) phosphatidylcholine metabolic process( GO:0046470 ) lipid catabolic process( GO:0016042 ) membrane( GO:0016020 ) calcium ion binding( GO:0005509 ) |
Trait Ontology | - |
Plant Ontology |
inflorescence( PO:0009049 )
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Related Strains | |
- | |
Phenotype images | |
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Last updated | |
Jun 20, 2022 |