Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol PLDdelta2
Gene Symbol Synonym OsPLDdelta2, RPLD5, OsPLDnu1, OsC2DP33, C2DP33
CGSNL Gene Name PHOSPHOLIPASE D DELTA 2
Gene Name Synonym Phospholipase D delta 2, Phospholipase D nu 1, C2 Domain-Containing Protein 33
Protein Name PHOSPHOLIPASE D DELTA 2
Allele
Chromosome No. 3
Explanation This gene controls pholspholipase D in rice, being located on chromosome 3 at 158.2cM distal to the marker RG418X (154.4cM). AF271358. OsPLDnu1 in Elias et al. 2002. PO:0030123: panicle inflorescence.
Trait Class Biochemical character
Expression
Sequence/Locus
cDNA Accession No. AK069703
MSU ID LOC_Os03g62410.1
LOC_Os03g62410.2
RAP ID Os03g0840800
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Zhang H., Zeng Y., Seo J., Kim Y.J., Kim S.T., Kwon S.W.
Int J Mol Sci 2022  23(4) 
Global Identification and Characterization of C2 Domain-Containing Proteins Associated with Abiotic Stress Response in Rice (<i>Oryza sativa</i> L.).
Li G, Lin F, Xue HW.
Cell Res 2007  17(10)  881-94.
Genome-wide analysis of the phospholipase D family in Oryza sativa and functional characterization of PLD beta 1 in seed germination.
McGee,J.D., Roe,J.L., Sweat,T.A., Wang,X., Guikema,J.A. and Leach,J.E.
Plant Cell Physiol. 2003  44(10)  1013-1026
Rice phospholipase d isoforms show differential cellular location and gene induction.
Elias,M., Potocky,M., Cvrckova,F. and V.
BMC Genomics. 2002  3(1)  2
Molecular diversity of phospholipase D in angiosperms.
TextPresso Search Search textpresso for PLDdelta2 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology phospholipase D activity( GO:0004630 )
NAPE-specific phospholipase D activity( GO:0070290 )
phosphatidylcholine metabolic process( GO:0046470 )
lipid catabolic process( GO:0016042 )
membrane( GO:0016020 )
calcium ion binding( GO:0005509 )
Trait Ontology -
Plant Ontology inflorescence( PO:0009049 )
Related Strains
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Phenotype images
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Last updated
Jun 20, 2022


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