Gene - Detail

Detail of Gene

Click here for feedback

Basic Information
CGSNL Gene Symbol PLDalpha4
Gene Symbol Synonym OsPLDalpha4, RPLD3, OsPLDeta2, OsC2DP50, C2DP50
Gene Name Synonym Phospholipase D alpha 4, phospholipase Dalpha4, phospholipase D eta 2, C2 Domain-Containing Protein 50
Chromosome No. 6
Explanation This gene controls phospholipase D in rice, being located on chromosome 5 at 87.5cM tandemly arrayed with RPLD2 and RPLD4, and flanked by markers RG648 (84.3cM), RG424 (84.7cM) and RG172 (102.9cM). AF271356. OsPLDeta2 in Elias et al. 2002.
Trait Class Biochemical character
Tolerance and resistance
Tolerance and resistance - Insect resistance
Tolerance and resistance - Stress tolerance
cDNA Accession No. AK100278
MSU ID LOC_Os06g40170.1
RAP ID Os06g0604200
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Link map Classical linkage map
Zhang H., Zeng Y., Seo J., Kim Y.J., Kim S.T., Kwon S.W.
Int J Mol Sci 2022  23(4) 
Global Identification and Characterization of C2 Domain-Containing Proteins Associated with Abiotic Stress Response in Rice (<i>Oryza sativa</i> L.).
Shaikh A.A., Alamin A., Jia C., Gong W., Deng X., Shen Q., Hong Y.
Int J Mol Sci 2022  23(17) 
The Examination of the Role of Rice Lysophosphatidic Acid Acyltransferase 2 in Response to Salt and Drought Stresses.
Wang L., Cao S., Wang P., Lu K., Song Q., Zhao F.J., Chen Z.J.
Proc. Natl. Acad. Sci. U.S.A. 2021  118(13) 
DNA hypomethylation in tetraploid rice potentiates stress-responsive gene expression for salt tolerance.
Ogawa S., Kawahara-Miki R., Miyamoto K., Yamane H., Nojiri H., Tsujii Y., Okada K.
Biochem. Biophys. Res. Commun. 2017  486(3)  796-803
OsMYC2 mediates numerous defence-related transcriptional changes via jasmonic acid signalling in rice.
Qi J., Zhou G., Yang L., Erb M., Lu Y., Sun X., Cheng J., Lou Y.
Plant Physiol. 2011  157(4)  1987-99
The Chloroplast-Localized Phospholipases D alpha4 and alpha5 Regulate Herbivore-Induced Direct and Indirect Defenses in Rice.
Shen P., Wang R., Jing W., Zhang W.
Journal of integrative plant biology 2011  53  289-299
Rice Phospholipase D留 is Involved in Salt Tolerance by the Mediation of H+-ATPase Activity and Transcription
Li G, Lin F, Xue HW.
Cell Res 2007  17(10)  881-94.
Genome-wide analysis of the phospholipase D family in Oryza sativa and functional characterization of PLD beta 1 in seed germination.
McGee,J.D., Roe,J.L., Sweat,T.A., Wang,X., Guikema,J.A. and Leach,J.E.
Plant Cell Physiol. 2003  44(10)  1013-1026
Rice phospholipase d isoforms show differential cellular location and gene induction.
Elias,M., Potocky,M., Cvrckova,F. and V.
BMC Genomics. 2002  3(1)  2
Molecular diversity of phospholipase D in angiosperms.
TextPresso Search Search textpresso for PLDalpha4 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Gene Ontology response to salt stress( GO:0009651 )
phospholipase D activity( GO:0004630 )
response to salicylic acid stimulus( GO:0009751 )
response to jasmonic acid stimulus( GO:0009753 )
response to abscisic acid stimulus( GO:0009737 )
response to gibberellin stimulus( GO:0009739 )
response to auxin stimulus( GO:0009733 )
response to cytokinin stimulus( GO:0009735 )
calcium ion binding( GO:0005509 )
membrane( GO:0016020 )
lipid catabolic process( GO:0016042 )
phosphatidylcholine metabolic process( GO:0046470 )
NAPE-specific phospholipase D activity( GO:0070290 )
Trait Ontology jasmonic acid sensitivity( TO:0000172 )
abscisic acid sensitivity( TO:0000615 )
gibberellic acid sensitivity( TO:0000166 )
auxin sensitivity( TO:0000163 )
cytokinin sensitivity( TO:0000167 )
salt tolerance( TO:0006001 )
Plant Ontology -
Related Strains
Phenotype images
Last updated
Feb 24, 2023