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Basic Information
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CGSNL Gene Symbol
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PLDalpha4
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Gene Symbol Synonym
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OsPLDalpha4, RPLD3, OsPLDeta2, OsC2DP50, C2DP50
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CGSNL Gene Name
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PHOSPHOLIPASE D ALPHA 4
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Gene Name Synonym
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Phospholipase D alpha 4, phospholipase Dalpha4, phospholipase D eta 2, C2 Domain-Containing Protein 50
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Protein Name
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PHOSPHOLIPASE D ALPHA 4
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Allele
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Chromosome No.
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6
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Explanation
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This gene controls phospholipase D in rice, being located on chromosome 5 at 87.5cM tandemly arrayed with RPLD2 and RPLD4, and flanked by markers RG648 (84.3cM), RG424 (84.7cM) and RG172 (102.9cM). AF271356. OsPLDeta2 in Elias et al. 2002.
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Trait Class
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Biochemical character
Tolerance and resistance
Tolerance and resistance - Insect resistance
Tolerance and resistance - Stress tolerance
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK100278
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MSU ID
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LOC_Os06g40170.1
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RAP ID
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Os06g0604200
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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Link to INSD Accession List
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Zhang H., Zeng Y., Seo J., Kim Y.J., Kim S.T., Kwon S.W.
Int J Mol Sci 2022 23(4)
Global Identification and Characterization of C2 Domain-Containing Proteins Associated with Abiotic Stress Response in Rice (<i>Oryza sativa</i> L.).
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Shaikh A.A., Alamin A., Jia C., Gong W., Deng X., Shen Q., Hong Y.
Int J Mol Sci 2022 23(17)
The Examination of the Role of Rice Lysophosphatidic Acid Acyltransferase 2 in Response to Salt and Drought Stresses.
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Wang L., Cao S., Wang P., Lu K., Song Q., Zhao F.J., Chen Z.J.
Proc. Natl. Acad. Sci. U.S.A. 2021 118(13)
DNA hypomethylation in tetraploid rice potentiates stress-responsive gene expression for salt tolerance.
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Ogawa S., Kawahara-Miki R., Miyamoto K., Yamane H., Nojiri H., Tsujii Y., Okada K.
Biochem. Biophys. Res. Commun. 2017 486(3) 796-803
OsMYC2 mediates numerous defence-related transcriptional changes via jasmonic acid signalling in rice.
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Qi J., Zhou G., Yang L., Erb M., Lu Y., Sun X., Cheng J., Lou Y.
Plant Physiol. 2011 157(4) 1987-99
The Chloroplast-Localized Phospholipases D alpha4 and alpha5 Regulate Herbivore-Induced Direct and Indirect Defenses in Rice.
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Shen P., Wang R., Jing W., Zhang W.
Journal of integrative plant biology 2011 53 289-299
Rice Phospholipase D留 is Involved in Salt Tolerance by the Mediation of H+-ATPase Activity and Transcription
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Li G, Lin F, Xue HW.
Cell Res 2007 17(10) 881-94.
Genome-wide analysis of the phospholipase D family in Oryza sativa and functional characterization of PLD beta 1 in seed germination.
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McGee,J.D., Roe,J.L., Sweat,T.A., Wang,X., Guikema,J.A. and Leach,J.E.
Plant Cell Physiol. 2003 44(10) 1013-1026
Rice phospholipase d isoforms show differential cellular location and gene induction.
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Elias,M., Potocky,M., Cvrckova,F. and V.
BMC Genomics. 2002 3(1) 2
Molecular diversity of phospholipase D in angiosperms.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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response to salt stress( GO:0009651 )
phospholipase D activity( GO:0004630 )
response to salicylic acid stimulus( GO:0009751 )
response to jasmonic acid stimulus( GO:0009753 )
response to abscisic acid stimulus( GO:0009737 )
response to gibberellin stimulus( GO:0009739 )
response to auxin stimulus( GO:0009733 )
response to cytokinin stimulus( GO:0009735 )
calcium ion binding( GO:0005509 )
membrane( GO:0016020 )
lipid catabolic process( GO:0016042 )
phosphatidylcholine metabolic process( GO:0046470 )
NAPE-specific phospholipase D activity( GO:0070290 )
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Trait Ontology
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jasmonic acid sensitivity( TO:0000172 )
abscisic acid sensitivity( TO:0000615 )
gibberellic acid sensitivity( TO:0000166 )
auxin sensitivity( TO:0000163 )
cytokinin sensitivity( TO:0000167 )
salt tolerance( TO:0006001 )
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Plant Ontology
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-
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Related Strains
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-
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Phenotype images
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-
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Last updated
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Feb 24, 2023
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