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Basic Information
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CGSNL Gene Symbol
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XA27
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Gene Symbol Synonym
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Xa27(t), Xa27(t)*, Xa27, XAL1, OsXAL1, Xa27C, OsXa27C
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CGSNL Gene Name
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XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 27
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Gene Name Synonym
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Xanthomonas oryzae pv. oryzae resistance 27, Xanthomonas campestris pv. oryzae resistance-27, Xa27-Like Gene 1
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Protein Name
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Allele
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xa27
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Chromosome No.
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6
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Explanation
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Bacterial blight (Xanthomonas rryzae pv. oryzae (X00)) resistance gene introduced from Oryza minuta, being located on the long arm of chromosome 6 flanked by markers M1081 and M1095. PO:0009011; plant structure ; PO:0000003; whole plant. AY986491, AY986492, AY986493. JF304301-JF304303, HQ888852-HQ888857, JN016505-JN016521, JN601064 (O. sativa and other wild rice species). GO:0140367: antibacterial innate immune response.
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Trait Class
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Tolerance and resistance - Disease resistance
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Expression
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Sequence/Locus
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cDNA Accession No.
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-
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MSU ID
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LOC_Os06g39810.1
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RAP ID
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Os06g0599600
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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Link to INSD Accession List
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Yang W., Yang Z., Yang L., Li Z., Zhang Z., Wei T., Huang R., Li G.
Genomics 2024 116(5) 110915
Genomic and transcriptomic analyses of the elite rice variety Huizhan provide insight into disease resistance and heat tolerance.
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Tian D., Teo J., Yin Z.
Mol. Plant Microbe Interact. 2024 37(2) 143-154
Ectopic Expression of the Executor-Type <i>R</i> Gene Paralog <i>Xa27B</i> in Rice Leads to Spontaneous Lesions and Enhanced disease resistance.
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Xu Z., Xu X., Li Y., Liu L., Wang Q., Wang Y., Wang Y., Yan J., Cheng G., Zou L., Zhu B., Chen G.
Plant Commun 2023 100721
Tal6b/AvrXa27A, a Hidden TALE Targeting both the Susceptibility Gene OsSWEET11a and the Resistance Gene Xa27 in Rice.
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Li T., Huang S., Zhou J., Yang B.
Mol Plant 2013
Designer TAL Effectors Induce Disease Susceptibility and Resistance to Xanthomonas oryzae pv. Oryzae in Rice.
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Bimolata,W., Kumar,A., Sundaram,R.M., Laha,G.S., Qureshi,I.A., Reddy,G.A. and Ghazi,I.A.
Planta 2013 238(2) 293-305
Analysis of nucleotide diversity among alleles of the major bacterial blight resistance gene Xa27 in cultivars of rice (Oryza sativa) and its wild relatives
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Nino-Liu, D.O., P.C. Ronald and A.J. Bogdanove
Mol. Plant Pathol. 2006 7(5) 303-324
Pathogen profile Xanthomonas oryzae pathovars: model pathogens of a model crop.
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Gu,K., Yang,B., Tian,D., Wu,L., Wang,D., Sreekala,C., Yang,F., Chu,Z., Wang,G.-L., White,F.F. and Yin,Z.
Nature 2005 435(7045) 1122-1125
R gene expression induced by a type-III effector triggers disease resistance in rice.
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Gu, K., D. Tian, F. Yang, L. Wu, C. Sreekala, D. Wang, G.L. Wang, Z. Yin
Theor. Appl. Genet. 2004 108 800-807
High-resolution genetic mapping of Xa27(t), a new bacterial blight resistance gene in rice, Oryza sativa L.
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DB Reference
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Gramene ID
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GR:0061464
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Ontologies
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Gene Ontology
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defense response to bacterium( GO:0042742 )
response to bacterium( GO:0009617 )
response to molecule of bacterial origin( GO:0002237 )
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Trait Ontology
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bacterial blight disease resistance( TO:0000175 )
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Plant Ontology
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whole plant( PO:0000003 )
plant structure( PO:0009011 )
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Related Strains
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-
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Phenotype images
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-
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Last updated
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Feb 25, 2026
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Update info.