Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol OUL1
Gene Symbol Synonym ROC5, Roc5(t), Roc5, GL2-5, OsROC5, CLF1, OsCLF1, OsOUL1, OsHDZ7, OsHDZIP7, HDZ7, HDZIP7
Gene Name Synonym Rice outmost cell -specific gene 5(t), Rice outermost cell-specific gene-5, Homeobox-leucine zipper protein ROC5, Homeodomain transcription factor ROC5, HD-ZIP protein ROC5, Protein RICE OUTERMOST CELL-SPECIFIC 5, GLABRA 2-like homeobox protein 5, outcurved leaf1, Rice ooutmost cell-specific gene5, curly leaf 1, homeodomain-leucine zipper transcription factor 7, OsHDZIP transcription factor 7
Allele oul1, clf1
Chromosome No. 2
Explanation Q6EPF0. AB101648. A GL2-type of homeobox gene. This gene is located on chromosome 2 at 44.5 cM of map position. Gl2-type homeobox. Arabidopsis GLABRA2 ortholog. homeodomain leucine zipper class IV gene. START domain protein (Steroidogenic acute regulatory protein-related lipid transfer domain protein, StAR-related lipid transfer domain protein). TO:0006064: rolled leaf.
Trait Class Vegetative organ - Leaf
Tolerance and resistance - Stress tolerance
cDNA Accession No. AK111544
MSU ID LOC_Os02g45250.1
RAP ID Os02g0674800
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Link map Classical linkage map
Mahtha S.K., Kumari K., Gaur V., Yadav G.
Comput Struct Biotechnol J 2023  21  3946-3963
Cavity architecture based modulation of ligand binding tunnels in plant START domains.
Ahmad S., Chen Y., Shah A.Z., Wang H., Xi C., Zhu H., Ge L.
Bioengineering (Basel) 2022  9(8) 
The Homeodomain-Leucine Zipper Genes Family Regulates the Jinggangmycin Mediated Immune Response of <i>Oryza sativa</i> to <i>Nilaparvata lugens</i>, and <i>Laodelphax striatellus</i>.
Liu X., Deng X.J., Li C.Y., Xiao Y.K., Zhao K., Guo J., Yang X.R., Zhang H.S., Chen C.P., Luo Y.T., Tang Y.L., Yang B., Sun C.H., Wang P.R.
Int J Mol Sci 2022  23(10) 
Mutation of Protoporphyrinogen IX Oxidase Gene Causes Spotted and rolled leaf and Its Overexpression Generates Herbicide Resistance in Rice.
Fang J., Guo T., Xie Z., Chun Y., Zhao J., Peng L., Zafar S.A., Yuan S., Xiao L., Li X.
Plant Physiol. 2021  185(4)  1722-1744
The Url1-ROC5-TPL2 transcriptional repressor complex represses the ACL1 gene to modulate leaf rolling in rice.
Chun Y., Fang J., Zafar S.A., Shang J., Zhao J., Yuan S., Li X.
Rice (N Y) 2020  13(1)  7
MINI SEED 2 (MIS2) Encodes a Receptor-like Kinase that Controls grain size and Shape in Rice.
Zhang X., Wang Y., Zhu X., Wang X., Zhu Z., Li Y., Xie J., Xiong Y., Yang Z., He G., Sang X.
Front Plant Sci 2020  11  616977
<i>Curled flag leaf 2</i>, Encoding a Cytochrome P450 Protein, Regulated by the Transcription Factor <i>Roc5</i>, Influences flag leaf Development in Rice.
Abbai R., Singh V.K., Nachimuthu V.V., Sinha P., Selvaraj R., Vipparla A.K., Singh A.K., Singh U.M., Varshney R.K., Kumar A.
Plant Biotechnol. J. 2019   
Haplotype analysis of key genes governing grain yield and quality traits across 3K RG panel reveals scope for the development of tailor-made rice with enhanced genetic gains.
Xu P., Ali A., Han B., Wu X.
Front Plant Sci 2018  9  1528
Current Advances in Molecular Basis and Mechanisms Regulating Leaf Morphology in Rice.
Zhou Y., Wang D., Wu T., Yang Y., Liu C., Yan L., Tang D., Zhao X., Zhu Y., Lin J., Liu X.
Molecular Breeding 2018  38 
LRRK1, a receptor-like cytoplasmic kinase, regulates leaf rolling through modulating bulliform cell development in rice
XING Bao, CHEN Zhen-hua, ZHANG Zhi-guo
BIOTECHNOLOGY BULLETIN 2017  33(9)  110-115
Map-based Cloning of a Curly Leaf Gene CLF1 in Rice
Yang S.Q., Li W.Q., Miao H., Gan P.F., Qiao L., Chang Y.L., Shi C.H., Chen K.M.
Rice (N Y) 2016  9(1)  37
rel2, A Gene Encoding An Unknown Function Protein which Contains DUF630 and DUF632 Domains Controls leaf rolling in Rice.
Zheng X., Yang S., Zhang D., Zhong Z., Tang X., Deng K., Zhou J., Qi Y., Zhang Y.
Plant Cell Rep. 2016   
Effective screen of CRISPR/Cas9-induced mutants in rice by single-strand conformation polymorphism.
Huang,C.F., Yamaji,N., Ono,K. and Ma,J.F.
Plant J. 2012  69(4)  565-576
A leucine-rich repeat receptor-like kinase gene is involved in the specification of outer cell layers in rice roots
Zou L.P. , Sun X.H. , Zhang Z.G. , Liu P. , Wu J.X. , Tian C.J. , Qiu J.L. , Lu T.G.
Plant Physiol. 2011  156(3)  1589-602
Leaf Rolling Controlled by the Homeodomain Leucine Zipper Class IV Gene Roc5 in Rice.
Ito, M., N. Sentoku, A. Nishimura, S.K. Hong, Y. Sato and M. Matsuoka
Breeding Science 2003  53  245-253
Roles of rice GL2-type homeobox genes in epidermis differentiation.
TextPresso Search Search textpresso for OUL1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0061420
Gene Ontology response to jasmonic acid stimulus( GO:0009753 )
response to brassinosteroid stimulus( GO:0009741 )
response to salt stress( GO:0009651 )
plasma membrane( GO:0005886 )
regulation of cell division( GO:0051302 )
response to water deprivation( GO:0009414 )
regulation of transcription, DNA-dependent( GO:0006355 )
transcription( GO:0006350 )
transcription factor activity( GO:0003700 )
nucleus( GO:0005634 )
sequence-specific DNA binding( GO:0043565 )
Trait Ontology leaf shape( TO:0000492 )
embryo related trait( TO:0000064 )
drought tolerance( TO:0000276 )
salt tolerance( TO:0006001 )
brassinosteroid sensitivity( TO:0002677 )
jasmonic acid sensitivity( TO:0000172 )
Plant Ontology plant embryo( PO:0009009 )
vascular leaf( PO:0009025 )
Related Strains
Phenotype images
Last updated
Nov 29, 2023