Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol ROC2
Gene Symbol Synonym Roc2(t), Roc2, GL2-2, OsHDZ17, OsHDZIP17, HDZ17, HDZIP17
CGSNL Gene Name RICE OUTMOST CELL-SPECIFIC GENE 2
Gene Name Synonym Rice outmost cell-specific gene 2(t), Rice outermost cell-specific gene-2, Homeobox-leucine zipper protein ROC2, Homeodomain transcription factor ROC2, HD-ZIP protein ROC2, Protein RICE OUTERMOST CELL-SPECIFIC 2, GLABRA 2-like homeobox protein 2, homeodomain-leucine zipper transcription factor 17, OsHDZIP transcription factor 17
Protein Name HOMEOBOX-LEUCINE ZIPPER PROTEIN ROC2
Allele
Chromosome No. 4
Explanation Q0J9X2. GL2-type of homeobox gene. This gene is located on chromosome 4 at 19.8 cM of map position. Gl2-type homeobox. START domain protein (Steroidogenic acute regulatory protein-related lipid transfer domain protein, StAR-related lipid transfer domain protein). PO:0030123: panicle inflorescence.
Trait Class Other
Expression
Sequence/Locus
cDNA Accession No. AK065819
MSU ID LOC_Os04g53540.1
LOC_Os04g53540.2
LOC_Os04g53540.3
LOC_Os04g53540.4
RAP ID Os04g0627000
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM)
Link map Classical linkage map
References
Mahtha S.K., Kumari K., Gaur V., Yadav G.
Comput Struct Biotechnol J 2023  21  3946-3963
Cavity architecture based modulation of ligand binding tunnels in plant START domains.
Ahmad S., Chen Y., Shah A.Z., Wang H., Xi C., Zhu H., Ge L.
Bioengineering (Basel) 2022  9(8) 
The Homeodomain-Leucine Zipper Genes Family Regulates the Jinggangmycin Mediated Immune Response of <i>Oryza sativa</i> to <i>Nilaparvata lugens</i>, and <i>Laodelphax striatellus</i>.
Ito, M., N. Sentoku, A. Nishimura, S.K. Hong, Y. Sato and M. Matsuoka
Breeding Science 2003  53  245-253
Roles of rice GL2-type homeobox genes in epidermis differentiation.
TextPresso Search Search textpresso for ROC2 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0061417
Ontologies
Gene Ontology nucleus( GO:0005634 )
sequence-specific DNA binding( GO:0043565 )
transcription factor activity( GO:0003700 )
regulation of transcription, DNA-dependent( GO:0006355 )
transcription( GO:0006350 )
Trait Ontology embryo related trait( TO:0000064 )
leaf shape( TO:0000492 )
Plant Ontology plant embryo( PO:0009009 )
vascular leaf( PO:0009025 )
root( PO:0009005 )
stem( PO:0009047 )
leaf( PO:0025034 )
carpel( PO:0009030 )
Related Strains
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Phenotype images
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Last updated
Nov 29, 2023


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