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Basic Information
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CGSNL Gene Symbol
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TMS5
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Gene Symbol Synonym
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OsTMS5, TRZ1, OsTRZ1, OsaTRZ1, ELAC1/TMS5, ELAC1, OsELAC1
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CGSNL Gene Name
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THERMOSENSITIVE MALE STERILITY 5
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Gene Name Synonym
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thermosensitive male sterility5, , RNase Z(S1), tRNase Z1, RNase ZS1, ribonuclease ZS1, thermo-sensitive genic male sterile 5
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Protein Name
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TRNASE Z1
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Allele
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tms5, tms5-1, tms5-2, nt-tms5-1
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Chromosome No.
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2
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Explanation
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Thermo-sensitive genic male-sterility gene, being located on chromosome 2 flanked by STS marker C365-1 and CAPs marker G227-1. GO:0090502: RNA phosphodiester bond hydrolysis, endonucleolytic.
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Trait Class
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Reproductive organ - Pollination, fertilization, fertility - Male sterility
Reproductive organ - Spikelet, flower, glume, awn
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK107283
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MSU ID
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LOC_Os02g12290.1
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RAP ID
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Os02g0214300
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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Link to INSD Accession List
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Liu W., Li J., Sun J., Liu C., Yan B., Zhou C., Li S., Song X., Yan W., Yang Y., Cao X.
Plant Commun 2025 6(2) 101192
The E3 ligase OsHel2 impedes readthrough of stalled mRNAs to regulate male fertility in thermosensitive genic male sterile rice.
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Peng G., Liu M., Luo Z., Deng S., Wang Q., Wang M., Chen H., Xiao Y., Zhang Y., Hong H., Zhu L., Liu Z., Zhou L., Wang Y., Zhuang C., Zhou H.
New Phytol. 2024 241(5) 2059-2074
An E3 ubiquitin ligase CSIT2 controls critical sterility-inducing temperature of thermo-sensitive genic male sterile rice.
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Yan B., Liu C., Sun J., Mao Y., Zhou C., Li J., Liu W., Li S., Yan W., Fu C., Qin P., Fu X., Zhao X., Song X., Nie J., Gao F., Yang Y., Chen Y., Cao X.
Cell Res. 2024 34(11) 763-775
Impaired 2',3'-cyclic phosphate tRNA repair causes thermo-sensitive genic male sterility in rice.
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Peng G., Liu M., Zhu L., Luo W., Wang Q., Wang M., Chen H., Luo Z., Xiao Y., Zhang Y., Hong H., Liu Z., Zhou L., Guo G., Wang Y., Zhuang C., Zhou H.
Mol Plant 2023 16(10) 1695-1709
The E3 ubiquitin ligase CSIT1 regulates critical sterility-inducing temperature by ribosome-associated quality control to safeguard two-line hybrid breeding in rice.
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Gu Z., Gong J., Zhu Z., Li Z., Feng Q., Wang C., Zhao Y., Zhan Q., Zhou C., Wang A., Huang T., Zhang L., Tian Q., Fan D., Lu Y., Zhao Q., Huang X., Yang S., Han B.
Nat. Genet. 2023 55(10) 1745-1756
Structure and function of rice hybrid genomes reveal genetic basis and optimal performance of heterosis.
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Wu J., Chen Y., Lin H., Chen Y., Yu H., Lu Z., Li X., Zhou H., Chen Z., Liu X.
Int J Mol Sci 2020 21(19)
Comparative Cytological and Transcriptome Analysis Revealed the Normal pollen Development Process and Up-Regulation of Fertility-Related Genes in Newly Developed Tetraploid Rice.
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Jin J., Gui S., Li Q., Wang Y., Zhang H., Zhu Z., Chen H., Sun Y., Zou Y., Huang X., Ding Y.
J Integr Plant Biol 2019
The transcription factor GATA10 regulates fertility conversion of a two-line hybrid tms5 mutant rice via the modulation of UbL40 expression.
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Wen J., Wang L., Wang J., Zeng Y., Xu Y., Li S.
Theor. Appl. Genet. 2019 132(6) 1721-1732
The transcription factor OsbHLH138 regulates thermosensitive genic male sterility in rice via activation of tms5.
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Hirendra Nath Barman, Sheng Z., Fiaz S., Zhong M., Wu Y., Cai Y., Wang W., Jiao G., Tang S., Wei X., Hu P.
BMC Plant Biol. 2019 19(1) 109
Generation of a new thermo-sensitive genic male sterile rice line by targeted mutagenesis of tms5 gene through CRISPR/Cas9 system.
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Huang X., Yang S., Gong J., Zhao Q., Feng Q., Zhan Q., Zhao Y., Li W., Cheng B., Xia J., Chen N., Huang T., Zhang L., Fan D., Chen J., Zhou C., Lu Y., Weng Q., Han B.
Nature 2016 537(7622) 629-633
Genomic architecture of heterosis for yield traits in rice.
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Zhou H., Zhou M., Yang Y., Li J., Zhu L., Jiang D., Dong J., Liu Q., Gu L., Zhou L., Feng M., Qin P., Hu X., Song C., Shi J., Song X., Ni E., Wu X., Deng Q., Liu Z., Chen M., Liu Y.G., Cao X., Zhuang C.
Nat Commun 2014 5 4884
RNase Z(S1) processes UbL40 mRNAs and controls thermosensitive genic male sterility in rice.
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Fan L., Wang Z., Liu J., Guo W., Yan J., Huang Y.
BMC Evol. Biol. 2011 11 219
A survey of green plant tRNA 3'-end processing enzyme tRNase ZS, homologs of the candidate prostate cancer susceptibility protein ELAC2.
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Wang, Y.G., Q.H. Xing, Q.Y. Deng, F.S. Liang, L.P. Yuan, M.L. Wang, and B. Wang
Theor. Appl. Genet. 2003 107 917-921
Fine mapping of the rice thermo-sensitive genic male-sterile gene tms5.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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response to temperature stimulus( GO:0009266 )
response to heat( GO:0009408 )
metal ion binding( GO:0046872 )
pollen development( GO:0009555 )
tRNA 3'-end processing( GO:0042780 )
3'-tRNA processing endoribonuclease activity( GO:0042781 )
anther development( GO:0048653 )
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Trait Ontology
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pollen sterility( TO:0000053 )
male sterility( TO:0000437 )
genic male sterility-thermo sensitive( TO:0000067 )
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Plant Ontology
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anther development stage( PO:0001004 )
pollen development stage( PO:0001007 )
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Related Strains
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-
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Phenotype images
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-
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Last updated
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Feb 22, 2026
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Update info.