Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | _ |
| Gene Symbol Synonym | |
| CGSNL Gene Name | _ |
| Gene Name Synonym | |
| Protein Name | |
| Allele | |
| Chromosome No. | 10 |
| Explanation | One of three hub genes in DEGs identified among AG (Anaerobic germination) stress, cold stress and conbined AG and cold stresses (Thapa et al. 2023). |
| Trait Class |
Tolerance and resistance - Stress tolerance
|
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK062588
|
| MSU ID |
LOC_Os10g36180.1
|
| RAP ID |
Os10g0505900 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
- |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
|
Thapa R., Tabien R.E., Johnson C.D., Septiningsih E.M.
BMC Genomics 2023 24(1) 185 Comparative transcriptomic analysis of germinating rice seedlings to individual and combined anaerobic and cold stress.
|
|
| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
response to flooding( GO:0009413 )
response to anoxia( GO:0034059 ) response to cold( GO:0009409 ) response to abscisic acid stimulus( GO:0009737 ) response to hypoxia( GO:0001666 ) |
| Trait Ontology |
oxygen sensitivity( TO:0000015 )
cold tolerance( TO:0000303 ) flooding related trait( TO:0000114 ) |
| Plant Ontology | - |
| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Oct 2, 2023 | |
