Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | LPXC |
| Gene Symbol Synonym | OsLPXC |
| CGSNL Gene Name | LPX FAMILY PROTEIN C |
| Gene Name Synonym | LPX family protein C |
| Protein Name | LPX FAMILY PROTEIN C |
| Allele | oslpxc, oslpxc1-1, oslpxc1-2, oslpxc1-3 |
| Chromosome No. | 3 |
| Explanation | an UDP-3-O-N-acetylglucosamine deacetylase. GO:0103117: UDP-3-O-acyl-N-acetylglucosamine deacetylase activity. GO:2001289: lipid X metabolic process. GO:1902882: regulation of response to oxidative stress. GO:0072593: reactive oxygen species metabolic process. GO:1903427: negative regulation of reactive oxygen species biosynthetic process. GO:2000121: regulation of removal of superoxide radicals. GO:0061691: detoxification of hydrogen peroxide. |
| Trait Class |
Biochemical character
Tolerance and resistance - Stress tolerance |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK066490
|
| MSU ID |
LOC_Os03g12320.1
LOC_Os03g12320.2 LOC_Os03g12320.3 |
| RAP ID |
Os03g0223900 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
- |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
|
Islam F., Khan M.S.S., Ahmed S., Abdullah M., Hannan F., Chen J.
Free Radic. Biol. Med. 2023 199 2-16 OsLPXC negatively regulates tolerance to cold stress via modulating oxidative stress, antioxidant defense and JA accumulation in rice.
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|
| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
negative regulation of superoxide release( GO:0032929 )
negative regulation of hydrogen peroxide biosynthetic process( GO:0010730 ) cell redox homeostasis( GO:0045454 ) removal of superoxide radicals( GO:0019430 ) regulation of jasmonic acid biosynthetic process( GO:0080141 ) response to oxidative stress( GO:0006979 ) response to cold( GO:0009409 ) lipid A biosynthetic process( GO:0009245 ) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity( GO:0008759 ) metal ion binding( GO:0046872 ) mitochondrion( GO:0005739 ) |
| Trait Ontology |
cold tolerance( TO:0000303 )
oxidative stress( TO:0002657 ) jasmonic acid content( TO:0002668 ) heat tolerance( TO:0000259 ) salt tolerance( TO:0006001 ) drought tolerance( TO:0000276 ) hydrogen peroxide content( TO:0000605 ) relative chlorophyll content( TO:0001016 ) leaf rolling tolerance( TO:0002662 ) relative biomass( TO:0000143 ) |
| Plant Ontology | - |
| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Sep 28, 2023 | |
