Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol DES1
Gene Symbol Synonym OsDES1
CGSNL Gene Name DEFECTIVE EMBRYO SAC 1
Gene Name Synonym defective embryo sac1
Protein Name
Allele des1
Chromosome No. 3
Explanation a putative nuclear envelope membrane protein (NEMP)-domain-containing protein. TO:0000862: floral organ morphology trait.
Trait Class Reproductive organ - Pollination, fertilization, fertility
Reproductive organ - Pollination, fertilization, fertility - Male sterility
Reproductive organ - Pollination, fertilization, fertility - Female sterility
Expression
Sequence/Locus
cDNA Accession No. AK068917
MSU ID LOC_Os03g31570.1
RAP ID Os03g0430000
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Zhao C., Li Q., Ge Q., Chen R., Yu H., Wu J., Liu X., Lu Z.
Rice (N Y) 2024  17(1)  41
Lectin Receptor-Like Protein Kinase OsNRFG6 is Required for Embryo Sac Development and Fertilization in Neo-Tetraploid Rice.
Hu X., Yu P., Zhang Y., Gao Z., Sun B., Wu W., Deng C., Abbas A., Hong Y., Sun L., Liu Q., Xue P., Wang B., Zhan X., Cao L., Cheng S.
J. Exp. Bot. 2023  74(5)  1501-1516
Mutation of DEFECTIVE EMBRYO SAC1 results in a low seed-setting rate in rice by regulating embryo sac development.
DB Reference
Gramene ID -
Ontologies
Gene Ontology tapetal layer development( GO:0048658 )
pollen development( GO:0009555 )
pollen germination( GO:0009846 )
pollen tube growth( GO:0009860 )
stamen development( GO:0048443 )
mitotic cell cycle( GO:0000278 )
photoperiodism, flowering( GO:0048573 )
floral organ development( GO:0048437 )
cytokinin mediated signaling( GO:0009736 )
reproductive structure development( GO:0048608 )
fertilization( GO:0009566 )
cytoplasm( GO:0005737 )
plasma membrane( GO:0005886 )
nucleus( GO:0005634 )
embryo sac development( GO:0009553 )
nuclear inner membrane( GO:0005637 )
Trait Ontology seed set percent( TO:0000455 )
embryo development trait( TO:0000620 )
cytokinin content( TO:0002660 )
floral organ development trait( TO:0006022 )
plant height( TO:0000207 )
days to heading( TO:0000137 )
flowering time( TO:0002616 )
panicle length( TO:0000040 )
panicle color( TO:0000201 )
stamen number( TO:0000225 )
pollen fertility( TO:0000421 )
stamen length( TO:0002609 )
female sterility( TO:0000358 )
pollen abortion type( TO:0000218 )
spikelet fertility( TO:0000180 )
Plant Ontology plant embryo stage( PO:0007631 )
carpel( PO:0009030 )
anther( PO:0009066 )
plant ovule( PO:0020003 )
embryo sac( PO:0025074 )
inner integument( PO:0020022 )
outer integument( PO:0020023 )
reproductive shoot system development stage( PO:0025530 )
floral organ formation stage( PO:0025585 )
pollen development stage( PO:0001007 )
anther development stage( PO:0001004 )
Related Strains
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Phenotype images
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Last updated
Sep 26, 2024

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