Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | HLH46 |
| Gene Symbol Synonym | OsbHLH, OsHLH46 |
| CGSNL Gene Name | HELIX-LOOP-HELIX 46 |
| Gene Name Synonym | basic helix-loop-helix protein, Helix-loop-helix 46 |
| Protein Name | HELIX-LOOP-HELIX PROTEIN 46 |
| Allele | oshlh46, oshlh46-1, oshlh46-2 |
| Chromosome No. | 1 |
| Explanation | GO:0090575: RNA polymerase II transcription regulator complex. GO:0000981: DNA-binding transcription factor activity, RNA polymerase II-specific. GO:0000977: RNA polymerase II transcription regulatory region sequence-specific DNA binding. GO:1900150: regulation of defense response to fungus. |
| Trait Class |
Tolerance and resistance - Disease resistance
Other |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK070332
|
| MSU ID |
LOC_Os01g01870.1
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| RAP ID |
Os01g0108600 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
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| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
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Wang X., Diao Z., Cao C., Liu Y., Xia N., Zhang Y., Lu L., Kong F., Zhou H., Chen L., Zhang J., Wang B., Huang R., Tang D., Li S.
J Integr Plant Biol 2024 The receptor-like cytoplasmic kinase OsBSK1-2 regulates immunity via an HLH/bHLH complex.
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Qiao W., Wang Y., Xu R., Yang Z., Sun Y., Su L., Zhang L., Wang J., Huang J., Zheng X., Liu S., Tian Y., Chen L., Liu X., Lan J., Yang Q.
Theor. Appl. Genet. 2021 134(5) 1531-1543 A functional chromogen gene C from wild rice is involved in a different anthocyanin biosynthesis pathway in indica and japonica.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
transcription factor activity( GO:0003700 )
DNA binding( GO:0003677 ) regulation of transcription from RNA polymerase II promoter( GO:0006357 ) protein dimerization activity( GO:0046983 ) nucleus( GO:0005634 ) defense response to fungus( GO:0050832 ) plasma membrane( GO:0005886 ) response to jasmonic acid stimulus( GO:0009753 ) jasmonic acid mediated signaling pathway( GO:0009867 ) callose deposition in cell wall during defense response( GO:0052544 ) response to chitin( GO:0010200 ) response to molecule of fungal origin( GO:0002238 ) positive regulation of immune response( GO:0050778 ) |
| Trait Ontology |
blast disease( TO:0000074 )
jasmonic acid sensitivity( TO:0000172 ) hydrogen peroxide content( TO:0000605 ) |
| Plant Ontology | - |
| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Jan 22, 2025 | |
