Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | CSIT1 |
| Gene Symbol Synonym | OsRING184, RING184, OsCSIT1, OsLtn1, Ltn1 |
| CGSNL Gene Name | CRITICAL STERILITY-INDUCING TEMPERATURE 1 |
| Gene Name Synonym | RING-type E3 ubiquitin ligase 184, OsListerin, Listerin |
| Protein Name | RING-TYPE E3 UBIQUITIN LIGASE 184 |
| Allele | csit1, csit1-1, csit1-2, Cas9CSIT1-1, Cas9CSIT1-2 |
| Chromosome No. | 1 |
| Explanation | rice homolog of yeast Ltn1 and mammalian Listerin. GO:1990112: RQC complex. GO:0061630: ubiquitin protein ligase activity. GO:0072344: rescue of stalled ribosome. GO:1990116: ribosome-associated ubiquitin-dependent protein catabolic process. GO:2000377: regulation of reactive oxygen species metabolic process. |
| Trait Class |
Reproductive organ - Pollination, fertilization, fertility - Fertility restoration
Reproductive organ - Pollination, fertilization, fertility - Male sterility Tolerance and resistance - Stress tolerance |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. | - |
| MSU ID |
LOC_Os01g74610.1
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| RAP ID |
Os01g0977600 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
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| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
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Peng G., Liu M., Zhu L., Luo W., Wang Q., Wang M., Chen H., Luo Z., Xiao Y., Zhang Y., Hong H., Liu Z., Zhou L., Guo G., Wang Y., Zhuang C., Zhou H.
Mol Plant 2023 16(10) 1695-1709 The E3 ubiquitin ligase CSIT1 regulates critical sterility-inducing temperature by ribosome-associated quality control to safeguard two-line hybrid breeding in rice.
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Wang R., You X., Zhang C., Fang H., Wang M., Zhang F., Kang H., Xu X., Liu Z., Wang J., Zhao Q., Wang X., Hao Z., He F., Tao H., Wang D., Wang J., Fang L., Qin M., Zhao T., Zhang P., Xing H., Xiao Y., Liu W., Xie Q., Wang G.L., Ning Y.
Genome Biol. 2022 23(1) 154 An ORFeome of rice E3 ubiquitin ligases for global analysis of the ubiquitination interactome.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
regulation of programmed cell death( GO:0043067 )
ribosomal small subunit binding( GO:0043024 ) anther development( GO:0048653 ) response to heat( GO:0009408 ) misfolded or incompletely synthesized protein catabolic process( GO:0006515 ) cytoplasm( GO:0005737 ) protein ubiquitination( GO:0016567 ) zinc ion binding( GO:0008270 ) ribosomal large subunit binding( GO:0043023 ) cytosol( GO:0005829 ) pollen development( GO:0009555 ) |
| Trait Ontology |
genic male sterility-thermo sensitive( TO:0000067 )
heat tolerance( TO:0000259 ) male fertility restoration trait( TO:0000308 ) pollen fertility( TO:0000421 ) |
| Plant Ontology |
anther development stage( PO:0001004 )
anther( PO:0009066 ) anther wall tapetum( PO:0009071 ) anther wall middle layer( PO:0004700 ) microspore( PO:0020048 ) pollen development stage( PO:0001007 ) |
| Related Strains | |
| - | |
| Phenotype images | |
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| Last updated | |
| Mar 1, 2025 | |
